iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043718

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000851

Gene Name

LOC100818226; GLYMA_18G071300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA18G07920	GLYMA18G07920.1	GLYMA18G07920.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-28	99.4	63	102
UBD/Beta-Prp	1.70e-41	144.0	113	295

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHtdsv  l++     +l++++s+D+t+++WD r+g++ +
   Q: 63   GHTDSVDQLCWdpKHaDLIATASGDKTVRLWDARSGKCSQ 102
           8**********9533799*******************987 PP

UBD/Beta-Prp

   S: 58   vkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnl 151
           ++++pdg   + g +D+ + + d++++k++h  k  +++v  ++++ +g+ +  ++   t++v   ++   l  tl  h++   c++++p g++
   Q: 113  ITYKPDGTHVAVGNRDDELTILDVRKFKPIHRRK-FNYEVNEIAWNMTGEMFFLTTGNGTVEVLSYPSLRPLD-TLMAHTAGCYCIAIDPVGRY 204
           7899*****************************9.**************99999999******999******9.******************** PP
   S: 152  lvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDg 244
           ++ Gs+D+ v lWd++ + ++rt+t+  + +v+ + f+++g +++s+s+d  + + +++tg++v++  + ++ ++sv+  p+ ++l+ +++D+
   Q: 205  FAVGSADSLVSLWDISEMLCVRTFTK-LEWPVRTIGFNYTGDFIASASEDLFIDISNVHTGRTVHQIPC-RAAMNSVEWNPKYNLLAYAGDDK 295
           *************************9.**********************************97776665.788999***99999999999997 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MEEQIPFKNL HNREYSGHKK KVHSVAWNCI GTKLASGSVD QTARIWHIEP HGHGKVKDIE 60
LKGHTDSVDQ LCWDPKHADL IATASGDKTV RLWDARSGKC SQQAELSGEN INITYKPDGT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAACACACA CAATACAACA CTCACGCTTT CTCCTGTTCC TACTTGTGCG TTTCCACTGT 60
CATTAGACAG TAGACACCGT TCACAGCAAT CACAGTTACT GGGAATCTTT CTACTCAAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000445--C:THO complex part of transcription export complex
GO:0006406--P:mRNA export from nucleus

KEGG

gmx:100812126

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000099	Aegilops tauschii	76.69	2.00e-142	498.00
IUUC-Atr-003050	Amborella trichopoda	87.94	1.00e-170	592.00
IUUC-Bci-013639	Botrytis cinerea	29.68	6.00e-43	167.00
IUUC-Bdi-015049	Brachypodium distachyon	76.36	8.00e-147	513.00
IUUC-Cel-018699	Caenorhabditis elegans	28.57	4.00e-33	135.00
IUUC-Cgl-026744	Colletotrichum gloeosporioides	32.15	7.00e-48	184.00
IUUC-Dse-031341	Dothistroma septosporum	29.97	6.00e-35	141.00
IUUC-Fox-037894	Fusarium oxysporum	32.41	1.00e-49	190.00
IUUC-Hvu-047633	Hordeum vulgare	74.88	2.00e-99	354.00
IUUC-Lpe-051061	Leersia perrieri	67.31	6.00e-122	430.00
IUUC-Mtr-057927	Medicago truncatula	94.25	3.00e-180	624.00
IUUC-Mla-058945	Melampsora laricipopulina	38.23	3.00e-49	188.00
IUUC-Mvi-060344	Microbotryum violaceum	31.79	2.00e-41	162.00
IUUC-Mac-064579	Musa acuminata	84.71	2.00e-166	577.00
IUUC-Ncr-068654	Neurospora crassa	30.46	4.00e-39	155.00
IUUC-Oba-075902	Oryza barthii	67.10	6.00e-122	430.00
IUUC-Obr-076613	Oryza brachyantha	74.84	3.00e-142	497.00
IUUC-Ogl-077009	Oryza glaberrima	74.84	9.00e-143	499.00
IUUC-Ogu-078344	Oryza glumaepatula	67.10	6.00e-122	430.00
IUUC-Oin-079773	Oryza indica	74.84	9.00e-143	499.00
IUUC-Oni-082263	Oryza nivara	67.10	6.00e-122	430.00
IUUC-Opu-083813	Oryza punctata	75.16	2.00e-143	501.00
IUUC-Oru-084610	Oryza rufipogon	67.10	5.00e-122	430.00
IUUC-Osa-085415	Oryza sativa	74.52	3.00e-142	497.00
IUUC-Olu-087649	Ostreococcus lucimarinus	41.58	4.00e-62	231.00
IUUC-Ppa-095195	Physcomitrella patens	84.64	8.00e-162	562.00
IUUC-Pop-099409	Populus trichocarpa	92.65	5.00e-179	619.00
IUUC-Ppe-101321	Prunus persica	90.45	4.00e-174	603.00
IUUC-Pte-104271	Pyrenophora teres	31.02	2.00e-39	155.00
IUUC-Spo-108324	Schizosaccharomyces pombe	37.04	1.00e-53	202.00
IUUC-Smo-108990	Selaginella moellendorffii	79.62	7.00e-156	543.00
IUUC-Sit-110773	Setaria italica	75.08	3.00e-140	491.00
IUUC-Sly-111619	Solanum lycopersicum	88.50	4.00e-172	597.00
IUUC-Stu-112241	Solanum tuberosum	88.50	2.00e-171	594.00
IUUC-Sbi-114842	Sorghum bicolor	74.10	2.00e-138	485.00
IUUC-Sre-115070	Sporisorium reilianum	33.43	1.00e-49	189.00
IUUC-Tca-121279	Theobroma cacao	92.97	2.00e-180	624.00
IUUC-Tre-121952	Trichoderma reesei	32.12	2.00e-49	189.00
IUUC-Tvi-122581	Trichoderma virens	32.51	7.00e-50	191.00
IUUC-Tae-125697	Triticum aestivum	75.08	2.00e-145	508.00
IUUC-Tur-126279	Triticum urartu	73.31	7.00e-141	493.00
IUUC-Uma-129547	Ustilago maydis	35.88	3.00e-50	192.00
IUUC-Vvi-131345	Vitis vinifera	93.61	1.00e-180	624.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence