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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Ath-006579
Ensembl Protein ID AT3G20740.1
UniProt Accession Q9LT47; Q9XF44; FIE_ARATH
Genbank Protein ID AAD23584.1; BAB02481.1; AEE76418.1; BAC41793.1; AAO63390.1
Protein Name Polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM; Protein FERTILIZATION-INDEPENDENT SEED 3
Genbank Nucleotide ID AF129516; AB025629; CP002686; AK117114; BT005326
Gene Name FIE; FIS3; At3g20740; MOE17.5
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT3G20740 AT3G20740.1 AT3G20740.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
PINAHINTMentha
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 7.70e-20 71.1 172 204
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           gH  +v +++f  sd  +++s++ D tik+W++
   Q: 172  GHRYEVLSVDFhpSDiYRFASCGMDTTIKIWSM 204
           899*********999****************97 PP
   
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They probably act via the methylation of histones, rendering chromatin heritably changed in its expressibility. Required to prevent the proliferation of the central cell by repressing unknown target genes before fertilization. Probably also involved in floral repression mechanism established during early plant development. Regulates the anteroposterior organization of the endosperm. Interacts with the promoter and repress the transcription of genes such as PHE1, that are paternally active and maternally silenced.
 Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They probably act via the methylation of histones, rendering chromatin heritably changed in its expressibility. Required to prevent the proliferation of the central cell by repressing unknown target genes before fertilization. Probably also involved in floral repression mechanism established during early plant development. Regulates the anteroposterior organization of the endosperm. Interacts with the promoter and repress the transcription of genes such as PHE1, that are paternally active and maternally silenced.
Protein Sequence
(Fasta)
MSKITLGNES IVGSLTPSNK KSYKVTNRIQ EGKKPLYAVV FNFLDARFFD VFVTAGGNRI 60
TLYNCLGDGA ISALQSYADE DKEESFYTVS WACGVNGNPY VAAGGVKGII RVIDVNSETI 120
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Protein Fasta Sequence


>IUUC-Ath-006579|E3,WD_repeat|Arabidopsis thaliana
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Nucleotide Sequence
(Fasta)
AAAGGTGAGT TGTGTGTTGT GTCAGGTCCA AAATAAAAGT TTGTCGTGAG GTCAAAATCT 60
ACGGTTACAG TAATTTTAAT AACCTGTGAA TCTGTGTCTA ATCGAAAATT ACAAAACACC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-006579|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0217--Developmental protein
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0005677--C:chromatin silencing complex
GO:0043078--C:polar nucleus
GO:0003700--F:transcription factor activity, sequence-specific DNA binding
GO:0016571--P:histone methylation
GO:0007275--P:multicellular organism development
GO:2000014--P:regulation of endosperm development
GO:0006349--P:regulation of gene expression by genetic imprinting
GO:0009409--P:response to cold
GO:0006351--P:transcription, DNA-templated
KEGG ath:AT3G20740
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000689 Aegilops tauschii 68.51 6.00e-157 546.00
IUUC-Aml-001510 Ailuropoda melanoleuca 40.06 1.00e-71 263.00
IUUC-Atr-002496 Amborella trichopoda 72.17 2.00e-151 527.00
IUUC-Apl-003768 Anas platyrhynchos 40.56 2.00e-74 272.00
IUUC-Aca-004382 Anolis carolinensis 40.56 1.00e-74 273.00
IUUC-Aly-005980 Arabidopsis lyrata 98.10 0.00e+00 754.00
IUUC-Ame-010987 Astyanax mexicanus 40.85 3.00e-73 268.00
IUUC-Bta-013432 Bos taurus 40.56 2.00e-75 275.00
IUUC-Bci-013970 Botrytis cinerea 28.95 6.00e-23 101.00
IUUC-Bdi-014553 Brachypodium distachyon 70.52 9.00e-160 555.00
IUUC-Bol-016522 Brassica oleracea 93.50 0.00e+00 723.00
IUUC-Bra-017137 Brassica rapa 93.50 0.00e+00 725.00
IUUC-Cel-018494 Caenorhabditis elegans 25.06 3.00e-22 99.00
IUUC-Cja-019066 Callithrix jacchus 40.56 2.00e-75 275.00
IUUC-Cfa-021261 Canis familiaris 40.56 2.00e-75 275.00
IUUC-Cpo-022375 Cavia porcellus 36.83 2.00e-63 235.00
IUUC-Csa-024005 Chlorocebus sabaeus 40.56 2.00e-75 275.00
IUUC-Cho-024881 Choloepus hoffmanni 40.76 7.00e-49 187.00
IUUC-Cin-025697 Ciona intestinalis 40.44 2.00e-75 275.00
IUUC-Csv-026221 Ciona savignyi 39.78 4.00e-75 274.00
IUUC-Cgl-026519 Colletotrichum gloeosporioides 27.37 5.00e-19 88.60
IUUC-Cne-026877 Cryptococcus neoformans 25.91 7.00e-19 88.60
IUUC-Cme-027353 Cyanidioschyzon merolae 40.28 2.00e-26 113.00
IUUC-Dre-028346 Danio rerio 40.90 3.00e-73 268.00
IUUC-Dno-029319 Dasypus novemcinctus 40.28 8.00e-75 273.00
IUUC-Dor-030746 Dipodomys ordii 31.37 6.00e-47 181.00
IUUC-Dse-031324 Dothistroma septosporum 28.99 4.00e-22 98.60
IUUC-Dme-031874 Drosophila melanogaster 39.55 1.00e-73 269.00
IUUC-Ete-032880 Echinops telfairi 37.02 4.00e-38 151.00
IUUC-Eca-034272 Equus caballus 40.56 2.00e-75 275.00
IUUC-Eeu-035303 Erinaceus europaeus 37.47 1.00e-68 253.00
IUUC-Fca-036008 Felis catus 40.56 2.00e-75 275.00
IUUC-Fal-037577 Ficedula albicollis 40.56 4.00e-74 271.00
IUUC-Fso-038294 Fusarium solani 33.33 6.00e-25 107.00
IUUC-Gmo-039008 Gadus morhua 39.71 1.00e-64 239.00
IUUC-Ggr-039894 Gaeumannomyces graminis 30.21 2.00e-18 86.70
IUUC-Gga-040859 Gallus gallus 40.56 2.00e-74 272.00
IUUC-Gac-041667 Gasterosteus aculeatus 41.25 5.00e-67 247.00
IUUC-Gma-043832 Glycine max 75.07 8.00e-174 602.00
IUUC-Ggo-045624 Gorilla gorilla 37.89 2.00e-71 262.00
IUUC-Hsa-046505 Homo sapiens 40.56 2.00e-75 275.00
IUUC-Hvu-047228 Hordeum vulgare 71.10 7.00e-75 271.00
IUUC-Itr-048381 Ictidomys tridecemlineatus 40.56 2.00e-75 275.00
IUUC-Lch-050492 Latimeria chalumnae 40.00 2.00e-73 268.00
IUUC-Lpe-050807 Leersia perrieri 68.13 2.00e-156 544.00
IUUC-Loc-052361 Lepisosteus oculatus 40.62 4.00e-73 267.00
IUUC-Lma-053058 Leptosphaeria maculans 25.39 3.00e-15 75.90
IUUC-Laf-053941 Loxodonta africana 40.45 4.00e-75 274.00
IUUC-Mcc-055518 Macaca mulatta 37.89 2.00e-71 262.00
IUUC-Mor-056944 Magnaporthe oryzae 27.31 6.00e-18 85.10
IUUC-Mtr-058716 Medicago truncatula 71.82 1.00e-160 558.00
IUUC-Mga-059469 Meleagris gallopavo 40.56 2.00e-74 272.00
IUUC-Mmr-061026 Microcebus murinus 37.89 3.00e-71 261.00
IUUC-Mdo-062346 Monodelphis domestica 40.85 6.00e-75 273.00
IUUC-Mmu-063785 Mus musculus 40.56 2.00e-75 275.00
IUUC-Mac-064681 Musa acuminata 72.01 4.00e-171 593.00
IUUC-Mpu-066862 Mustela putorius furo 40.56 2.00e-75 275.00
IUUC-Mlu-067103 Myotis lucifugus 38.87 2.00e-70 258.00
IUUC-Ncr-068782 Neurospora crassa 33.14 3.00e-21 96.70
IUUC-Nle-069472 Nomascus leucogenys 40.56 2.00e-75 275.00
IUUC-Opr-070376 Ochotona princeps 39.47 9.00e-43 167.00
IUUC-Ont-071513 Oreochromis niloticus 41.48 3.00e-75 275.00
IUUC-Oan-073202 Ornithorhynchus anatinus 40.56 7.00e-75 273.00
IUUC-Ocu-074012 Oryctolagus cuniculus 40.56 2.00e-75 275.00
IUUC-Oba-075030 Oryza barthii 70.17 9.00e-161 558.00
IUUC-Obr-076895 Oryza brachyantha 68.75 8.00e-159 552.00
IUUC-Ogl-077522 Oryza glaberrima 71.26 2.00e-154 538.00
IUUC-Ogu-078250 Oryza glumaepatula 65.47 1.00e-143 502.00
IUUC-Oin-079886 Oryza indica 69.89 3.00e-160 556.00
IUUC-Olo-080238 Oryza longistaminata 70.66 7.00e-158 549.00
IUUC-Ome-081204 Oryza meridionalis 65.19 4.00e-142 496.00
IUUC-Oni-082388 Oryza nivara 60.77 4.00e-132 464.00
IUUC-Opu-083537 Oryza punctata 69.29 1.00e-159 555.00
IUUC-Oru-084863 Oryza rufipogon 65.75 1.00e-144 505.00
IUUC-Osa-085622 Oryza sativa 69.61 2.00e-159 554.00
IUUC-Ola-087426 Oryzias latipes 39.73 3.00e-66 246.00
IUUC-Olu-087788 Ostreococcus lucimarinus 32.99 2.00e-52 199.00
IUUC-Oga-088228 Otolemur garnettii 40.56 2.00e-75 275.00
IUUC-Oar-090139 Ovis aries 40.56 4.00e-75 274.00
IUUC-Pan-092874 Papio anubis 40.77 6.00e-56 209.00
IUUC-Psi-093927 Pelodiscus sinensis 40.79 7.00e-75 273.00
IUUC-Pma-094740 Petromyzon marinus 39.92 6.00e-43 167.00
IUUC-Pno-095072 Phaeosphaeria nodorum 22.52 3.00e-11 62.40
IUUC-Ppa-095871 Physcomitrella patens 65.22 1.00e-150 525.00
IUUC-Pfo-097208 Poecilia formosa 41.21 9.00e-75 273.00
IUUC-Pab-097658 Pongo abelii 40.56 2.00e-75 275.00
IUUC-Pop-098930 Populus trichocarpa 76.02 7.00e-179 619.00
IUUC-Ppe-101807 Prunus persica 75.14 3.00e-175 607.00
IUUC-Pva-103191 Pteropus vampyrus 33.95 2.00e-57 216.00
IUUC-Pgr-103619 Puccinia graminis 27.52 1.00e-17 83.60
IUUC-Pte-104406 Pyrenophora teres 25.91 1.00e-22 100.00
IUUC-Pyt-104821 Pyrenophora triticirepentis 24.38 5.00e-16 78.60
IUUC-Rno-105854 Rattus norvegicus 40.56 2.00e-75 275.00
IUUC-Sha-107426 Sarcophilus harrisii 40.85 6.00e-75 273.00
IUUC-Smo-109638 Selaginella moellendorffii 67.05 1.00e-148 518.00
IUUC-Sit-110481 Setaria italica 68.60 8.00e-156 542.00
IUUC-Sly-111464 Solanum lycopersicum 74.11 6.00e-174 602.00
IUUC-Stu-112910 Solanum tuberosum 74.11 1.00e-173 601.00
IUUC-Sar-113754 Sorex araneus 38.22 2.00e-66 245.00
IUUC-Sbi-114023 Sorghum bicolor 69.42 1.00e-156 545.00
IUUC-Ssc-115386 Sus scrofa 40.56 2.00e-75 275.00
IUUC-Tgu-117123 Taeniopygia guttata 40.56 2.00e-74 271.00
IUUC-Tru-117720 Takifugu rubripes 39.63 1.00e-71 263.00
IUUC-Tsy-119584 Tarsius syrichta 37.89 2.00e-71 262.00
IUUC-Tni-119695 Tetraodon nigroviridis 40.98 8.00e-74 270.00
IUUC-Tca-121787 Theobroma cacao 75.20 3.00e-178 616.00
IUUC-Tvi-122409 Trichoderma virens 27.36 3.00e-22 99.00
IUUC-Tae-124454 Triticum aestivum 68.51 6.00e-157 546.00
IUUC-Tme-126906 Tuber melanosporum 29.80 4.00e-33 135.00
IUUC-Tbe-127557 Tupaia belangeri 38.35 2.00e-68 252.00
IUUC-Vda-129774 Verticillium dahliae 26.87 1.00e-20 93.60
IUUC-Vpa-130256 Vicugna pacos 32.63 5.00e-56 211.00
IUUC-Vvi-131201 Vitis vinifera 75.27 2.00e-177 613.00
IUUC-Xtr-132206 Xenopus tropicalis 40.56 9.00e-74 270.00
IUUC-Xma-134102 Xiphophorus maculatus 41.48 5.00e-75 274.00
IUUC-Zma-135593 Zea mays 69.42 8.00e-157 545.00
Created Date 25-Jun-2017

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