iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121052

Ensembl Protein ID

EOY12866

UniProt Accession

A0A061F733; A0A061F733_THECC

Genbank Protein ID

EOY12866.1

Protein Name

Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

CM001885

Gene Name

TCM_031373

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_031373	EOY12866	EOY12866

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-25	88.7	606	640

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtg 33
           H+d vtc++f   +d++++sGs D ++++W++ ++
   Q: 606  HSDYVTCIQFnpvDDRYFISGSLDAKVRIWSIPDH 640
           9***********766***************98765 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSKNPIGSNN NQDDDDSTQE EEVVEVDEEE EEEEYFYESL DRIASSNSCS CSNSTSPSSD 60
SDSDPITRSN NAHHPFPVPK FPMAVSKFDI WISEPASVSE RRTRLLREMG LSRDRGLSRT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGAATTCTA AGGTGGGAGA AGTCAAGAAT TCATTAGCAT GTTTATCTAT TTGGGGGGGT 60
TTATCAAAGC ATGGATAATG ACCCTTCATG CTTCTTAATG TTTGTACCAC ATGAATCTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000157	Aegilops tauschii	52.64	1.00e-144	505.00
IUUC-Aml-001198	Ailuropoda melanoleuca	31.66	1.00e-55	210.00
IUUC-Atr-002683	Amborella trichopoda	57.96	1.00e-151	530.00
IUUC-Aly-005741	Arabidopsis lyrata	68.52	0.00e+00	882.00
IUUC-Ath-007063	Arabidopsis thaliana	67.91	0.00e+00	858.00
IUUC-Ago-007814	Ashbya gossypii	32.47	7.00e-39	154.00
IUUC-Acl-008290	Aspergillus clavatus	30.94	4.00e-43	169.00
IUUC-Bta-012991	Bos taurus	31.40	3.00e-55	209.00
IUUC-Bdi-014809	Brachypodium distachyon	54.12	4.00e-168	584.00
IUUC-Bol-016551	Brassica oleracea	68.38	0.00e+00	715.00
IUUC-Bra-017269	Brassica rapa	70.17	0.00e+00	847.00
IUUC-Cel-018681	Caenorhabditis elegans	36.44	5.00e-53	202.00
IUUC-Cfa-020909	Canis familiaris	31.60	1.00e-55	211.00
IUUC-Csa-023121	Chlorocebus sabaeus	31.40	5.00e-55	208.00
IUUC-Dor-030184	Dipodomys ordii	45.55	1.00e-42	167.00
IUUC-Dme-032135	Drosophila melanogaster	32.28	1.00e-56	214.00
IUUC-Eca-033319	Equus caballus	31.60	2.00e-55	210.00
IUUC-Eeu-035325	Erinaceus europaeus	31.90	1.00e-38	154.00
IUUC-Fca-036159	Felis catus	31.06	2.00e-49	190.00
IUUC-Gmo-039226	Gadus morhua	37.54	2.00e-52	200.00
IUUC-Gac-041620	Gasterosteus aculeatus	35.36	6.00e-53	201.00
IUUC-Gma-043178	Glycine max	77.56	0.00e+00	926.00
IUUC-Ggo-044646	Gorilla gorilla	31.40	6.00e-55	208.00
IUUC-Hsa-046353	Homo sapiens	31.40	7.00e-55	208.00
IUUC-Hvu-047755	Hordeum vulgare	52.48	2.00e-166	578.00
IUUC-Lpe-050824	Leersia perrieri	56.09	0.00e+00	670.00
IUUC-Laf-054066	Loxodonta africana	31.40	4.00e-55	209.00
IUUC-Mcc-055055	Macaca mulatta	31.40	5.00e-55	208.00
IUUC-Mtr-058330	Medicago truncatula	79.45	0.00e+00	927.00
IUUC-Mmr-060832	Microcebus murinus	31.40	3.00e-55	209.00
IUUC-Mac-064884	Musa acuminata	59.00	0.00e+00	683.00
IUUC-Mpu-065914	Mustela putorius furo	31.60	1.00e-55	211.00
IUUC-Nfi-068449	Neosartorya fischeri	30.85	1.00e-37	150.00
IUUC-Nle-069802	Nomascus leucogenys	31.40	5.00e-55	208.00
IUUC-Opr-071139	Ochotona princeps	45.55	1.00e-42	167.00
IUUC-Ont-072128	Oreochromis niloticus	32.34	4.00e-54	206.00
IUUC-Oba-075039	Oryza barthii	54.31	2.00e-167	582.00
IUUC-Obr-076635	Oryza brachyantha	58.60	0.00e+00	647.00
IUUC-Ogl-077572	Oryza glaberrima	54.31	6.00e-167	580.00
IUUC-Ogu-078005	Oryza glumaepatula	55.10	0.00e+00	655.00
IUUC-Oin-079138	Oryza indica	53.97	0.00e+00	654.00
IUUC-Olo-080846	Oryza longistaminata	51.89	8.00e-147	513.00
IUUC-Ome-081525	Oryza meridionalis	55.05	1.00e-166	579.00
IUUC-Oni-082452	Oryza nivara	56.74	0.00e+00	691.00
IUUC-Opu-084083	Oryza punctata	52.96	0.00e+00	638.00
IUUC-Oru-085211	Oryza rufipogon	55.10	0.00e+00	656.00
IUUC-Osa-086029	Oryza sativa	54.31	3.00e-167	581.00
IUUC-Oga-088623	Otolemur garnettii	31.40	5.00e-55	208.00
IUUC-Oar-090357	Ovis aries	31.40	3.00e-55	209.00
IUUC-Pan-092290	Papio anubis	30.57	4.00e-54	205.00
IUUC-Psi-094089	Pelodiscus sinensis	32.02	1.00e-56	214.00
IUUC-Ppa-095755	Physcomitrella patens	43.06	4.00e-104	372.00
IUUC-Pfo-097366	Poecilia formosa	31.70	4.00e-54	205.00
IUUC-Pab-098364	Pongo abelii	31.40	5.00e-55	208.00
IUUC-Pop-099492	Populus trichocarpa	84.00	0.00e+00	702.00
IUUC-Pca-100159	Procavia capensis	31.31	8.00e-38	151.00
IUUC-Ppe-101184	Prunus persica	80.85	0.00e+00	979.00
IUUC-Pva-102846	Pteropus vampyrus	45.55	8.00e-43	168.00
IUUC-Rno-105467	Rattus norvegicus	31.00	1.00e-54	207.00
IUUC-Sha-106778	Sarcophilus harrisii	31.60	4.00e-56	212.00
IUUC-Sja-107954	Schizosaccharomyces japonicus	36.94	9.00e-52	197.00
IUUC-Smo-108748	Selaginella moellendorffii	41.88	1.00e-113	403.00
IUUC-Sit-110585	Setaria italica	55.94	8.00e-177	613.00
IUUC-Sly-111804	Solanum lycopersicum	74.07	0.00e+00	917.00
IUUC-Stu-111949	Solanum tuberosum	65.36	0.00e+00	991.00
IUUC-Sbi-114330	Sorghum bicolor	57.59	1.00e-176	612.00
IUUC-Tgu-116614	Taeniopygia guttata	31.20	2.00e-55	210.00
IUUC-Tru-117808	Takifugu rubripes	39.51	6.00e-53	201.00
IUUC-Tni-120013	Tetraodon nigroviridis	38.37	1.00e-50	194.00
IUUC-Tae-125754	Triticum aestivum	56.26	4.00e-175	607.00
IUUC-Tur-126660	Triticum urartu	51.55	5.00e-172	597.00
IUUC-Tbe-127531	Tupaia belangeri	45.55	2.00e-41	164.00
IUUC-Ttr-128970	Tursiops truncatus	31.60	2.00e-55	210.00
IUUC-Vpa-130109	Vicugna pacos	45.55	2.00e-42	167.00
IUUC-Vvi-130908	Vitis vinifera	82.18	0.00e+00	972.00
IUUC-Xma-134131	Xiphophorus maculatus	31.70	4.00e-54	205.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence