iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s38280	POPTR_0001s38280.4	POPTR_0001s38280.4
POPTR_0001s38280	POPTR_0001s38280.2	POPTR_0001s38280.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.80e-09	36.7	499	540

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC++d+  k+   +l+CgH +hadCl+kw       + +  CP+C+
   Q: 499  CIICQDDYksKEKIASLDCGHEYHADCLKKW------LRLKNVCPICK 540
           ********88555999***************......**********6 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGQRNMLCTN QMIDLEMDQQ SQGYLHPESC ILLGGVTNFR PPDIPTMLTA SGNTINRDAH 60
LADRYDGAMF YGMPQYHGVH PHPQYHSPNL DLSVATAPNF YVPYMTPSSG IPISHASCDQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCCAACCAA TTCTAACATC TTTATGCTAA TATCTTGGCT ATGAAGCAGG TATAATTTGA 60
GATATGGGAC AAAGAAACAT GCTATGCACC AATCAGATGA TTGATTTAGA AATGGATCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0001s38280g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000861	Aegilops tauschii	29.95	2.00e-36	146.00
IUUC-Atr-002953	Amborella trichopoda	33.39	2.00e-51	196.00
IUUC-Bra-018007	Brassica rapa	38.43	2.00e-78	286.00
IUUC-Dre-028483	Danio rerio	38.46	3.00e-16	79.30
IUUC-Gmo-038772	Gadus morhua	37.50	3.00e-15	75.90
IUUC-Gma-043140	Glycine max	47.51	4.00e-118	417.00
IUUC-Hvu-047763	Hordeum vulgare	30.40	8.00e-38	150.00
IUUC-Mtr-058077	Medicago truncatula	36.02	2.00e-45	175.00
IUUC-Oba-075052	Oryza barthii	32.80	1.00e-48	186.00
IUUC-Obr-076274	Oryza brachyantha	33.51	3.00e-48	185.00
IUUC-Ogl-077324	Oryza glaberrima	32.32	6.00e-48	184.00
IUUC-Ogu-078173	Oryza glumaepatula	32.80	6.00e-49	187.00
IUUC-Oin-079682	Oryza indica	32.92	2.00e-48	186.00
IUUC-Olo-080830	Oryza longistaminata	50.75	4.00e-38	151.00
IUUC-Ome-081865	Oryza meridionalis	32.29	4.00e-43	168.00
IUUC-Oni-082807	Oryza nivara	33.33	7.00e-50	191.00
IUUC-Opu-083300	Oryza punctata	33.99	3.00e-43	169.00
IUUC-Oru-084217	Oryza rufipogon	32.74	2.00e-48	186.00
IUUC-Osa-086172	Oryza sativa	32.33	4.00e-48	185.00
IUUC-Ppe-101426	Prunus persica	59.53	2.00e-169	588.00
IUUC-Sit-110729	Setaria italica	33.02	5.00e-42	164.00
IUUC-Sbi-114233	Sorghum bicolor	30.41	9.00e-45	174.00
IUUC-Tru-117715	Takifugu rubripes	36.54	2.00e-15	76.30
IUUC-Tsy-118872	Tarsius syrichta	44.23	6.00e-09	57.40
IUUC-Tni-119691	Tetraodon nigroviridis	36.54	2.00e-15	76.30
IUUC-Tca-121540	Theobroma cacao	60.61	0.00e+00	650.00
IUUC-Tur-126318	Triticum urartu	31.32	4.00e-40	158.00
IUUC-Vvi-131107	Vitis vinifera	54.55	3.00e-157	547.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence