iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000016709.1	ENSONIT00000021066.1	ENSONIP00000021047.1
ENSONIG00000016709.1	ENSONIT00000021067.1	ENSONIP00000021048.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.60e-09	37.1	732	776

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C+vC++gge    l++C+kC ++fH aC+ ++  +e p+ e w+C+ Cr
   Q: 732  DWCAVCQNGGE----LLCCDKCPKVFHLACHIPT-LNESPSGE-WFCSFCR 776
           79*********....*******************.99999997.******8 PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

MDESAETVEN DDIVIIVENE AESLPAEEER LKQATFGLMD TCPVCKLSFH NREPKLLPCL 60
HSFCKRCLPA PFMSAEPRRD TQGQVDNSKP LVGIRCPVCR QECWEMDVLD NFFVKDSAEV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 60
CAAATCTACG CCCTTGATAC ACAGTTTACA GCGTACCGAA ATGCTGTTAC ACCCCAAGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003649--Bbox_C
IPR001487--Bromodomain
IPR019786--Zinc_finger_PHD-type_CS
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50014--BROMODOMAIN_2
PS50119--ZF_BBOX
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00439--Bromodomain
PF00628--PHD
PF00643--zf-B_box
PF13445--zf-RING_UBOX

PRINTS

PR00503--BROMODOMAIN

SMART

SM00502--BBC
SM00336--BBOX
SM00297--BROMO
SM00249--PHD
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006656	Arabidopsis thaliana	42.31	1.00e-12	69.70
IUUC-Ame-011506	Astyanax mexicanus	60.75	0.00e+00	1059.00
IUUC-Dre-028253	Danio rerio	57.31	0.00e+00	1006.00
IUUC-Gmo-039068	Gadus morhua	75.73	6.00e-89	322.00
IUUC-Gac-041865	Gasterosteus aculeatus	75.91	0.00e+00	1310.00
IUUC-Loc-052707	Lepisosteus oculatus	49.32	0.00e+00	801.00
IUUC-Ola-087300	Oryzias latipes	85.23	0.00e+00	650.00
IUUC-Pfo-096658	Poecilia formosa	71.73	0.00e+00	1404.00
IUUC-Smo-109527	Selaginella moellendorffii	44.59	1.00e-13	71.60
IUUC-Tru-118426	Takifugu rubripes	66.84	0.00e+00	1143.00
IUUC-Tca-121757	Theobroma cacao	50.00	3.00e-12	68.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence