iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114278

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G253000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g030840	Sb03g030840.1	Sb03g030840.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	3.30e-48	163.8	9	142

Active Site

Position(s)	Description	Evidence
89	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeekWspal 96
           R+ ke+++l ++p +gisa+p++e ++  ++v+ilGp+++pYeggvFkle+ +pe+YP+ +Pkv+fltki+hPn+++ G++Cl+ilk  +kWspal
   Q: 9    RIIKETQRLLSEPAPGISASPSEE-NMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILK--DKWSPAL 101
           899*********************.9************************************************************9..******* PP
   S: 97   svesvllsiqsllaepnpesplneeaaellkknreeykkkv 137
           ++++vllsiq+ll+ pnp++pl +++a+++k+n+ e  +++
   Q: 102  QIRTVLLSIQALLSAPNPDDPLSDNIAKHWKANEVEAVETA 142
           *********************************98766665 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MANSNLPRRI IKETQRLLSE PAPGISASPS EENMRYFNVM ILGPAQSPYE GGVFKLELFL 60
PEEYPMAAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA LQIRTVLLSI QALLSAPNPD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTGCAGCAA AAACCGCGTC CGCGTACAAT AGCGAGCGTC CAACTCCAAC CCACCACCGC 60
TTCCCCCGTT CCCCACCCCG ACCGACTGCT CCTCCTCCCC CGCGCCATCC TCAAGGCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding
GO:0006301--P:postreplication repair
GO:0070534--P:protein K63-linked ubiquitination

KEGG

sbi:SORBI_03g030840

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002818	Amborella trichopoda	96.08	3.00e-85	306.00
IUUC-Aly-005804	Arabidopsis lyrata	97.39	5.00e-86	308.00
IUUC-Ath-007639	Arabidopsis thaliana	96.08	3.00e-85	305.00
IUUC-Bdi-014811	Brachypodium distachyon	98.69	6.00e-87	311.00
IUUC-Bol-016613	Brassica oleracea	97.39	5.00e-86	308.00
IUUC-Bra-016938	Brassica rapa	97.39	5.00e-86	308.00
IUUC-Dno-030059	Dasypus novemcinctus	78.23	2.00e-68	250.00
IUUC-Fca-036161	Felis catus	77.55	2.00e-67	247.00
IUUC-Gmo-039561	Gadus morhua	79.59	8.00e-70	254.00
IUUC-Gac-042450	Gasterosteus aculeatus	79.05	3.00e-69	252.00
IUUC-Gma-042849	Glycine max	97.37	2.00e-85	306.00
IUUC-Hvu-047346	Hordeum vulgare	98.04	2.00e-86	310.00
IUUC-Kpa-049285	Komagataella pastoris	72.30	2.00e-65	239.00
IUUC-Lch-050548	Latimeria chalumnae	79.14	4.00e-66	242.00
IUUC-Lpe-051394	Leersia perrieri	99.35	3.00e-87	312.00
IUUC-Mtr-058552	Medicago truncatula	87.43	1.00e-81	294.00
IUUC-Mac-064742	Musa acuminata	97.39	4.00e-86	308.00
IUUC-Ont-072369	Oreochromis niloticus	79.05	1.00e-69	254.00
IUUC-Oba-075408	Oryza barthii	99.35	3.00e-87	312.00
IUUC-Obr-076881	Oryza brachyantha	99.35	3.00e-87	312.00
IUUC-Ogl-077242	Oryza glaberrima	99.35	3.00e-87	312.00
IUUC-Ogu-078465	Oryza glumaepatula	99.35	3.00e-87	312.00
IUUC-Oin-080035	Oryza indica	99.29	3.00e-80	289.00
IUUC-Olo-080555	Oryza longistaminata	99.35	3.00e-87	312.00
IUUC-Ome-081653	Oryza meridionalis	99.35	3.00e-87	312.00
IUUC-Oni-082400	Oryza nivara	99.35	3.00e-87	312.00
IUUC-Opu-083130	Oryza punctata	99.29	2.00e-79	287.00
IUUC-Oru-084649	Oryza rufipogon	99.35	3.00e-87	312.00
IUUC-Osa-085629	Oryza sativa	99.35	3.00e-87	312.00
IUUC-Ppa-096014	Physcomitrella patens	94.74	5.00e-84	301.00
IUUC-Pop-099707	Populus trichocarpa	97.39	4.00e-86	308.00
IUUC-Ppe-101520	Prunus persica	96.71	6.00e-85	305.00
IUUC-Sce-106178	Saccharomyces cerevisiae	68.03	2.00e-60	223.00
IUUC-Smo-109587	Selaginella moellendorffii	84.11	6.00e-74	268.00
IUUC-Sit-110069	Setaria italica	99.35	3.00e-87	312.00
IUUC-Sly-111322	Solanum lycopersicum	97.39	5.00e-86	308.00
IUUC-Stu-112254	Solanum tuberosum	98.04	2.00e-86	310.00
IUUC-Sre-114927	Sporisorium reilianum	76.71	1.00e-68	250.00
IUUC-Tca-121752	Theobroma cacao	94.44	6.00e-78	282.00
IUUC-Tae-125309	Triticum aestivum	98.04	2.00e-86	310.00
IUUC-Vvi-131416	Vitis vinifera	80.98	3.00e-81	293.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence