iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-100084

Ensembl Protein ID

POPTR_0001s39280.1

UniProt Accession

U5GSX8; U5GSX8_POPTR

Genbank Protein ID

ERP66640.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTR_0001s39280g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s39280	POPTR_0001s39280.1	POPTR_0001s39280.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.80e-17	61.7	174	211

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htds...vtclaf.sdtllvsGsdDgtikvWDlrtgvll 36
           H ++   +tc+ f +  +++s+s D+t+k+W+l +g+ l
   Q: 174  HDGPvtaITCIGFcH-YTVISCSTDCTCKLWSLLDGTNL 211
           556522266666642.779*************9998765 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSSSREIVLT SSPDGPITAY DIFSGTTLAR FSGSRSPRHG LVLAGKAYIA ASHISSATAS 60
GSIHLYNWWS STAFHHLPVP EPVAPLAATP DGSFLFAGGV SGNIYALSIP SGNILKSFPA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTTCTT CTCGTGAGAT TGTCCTCACT AGCTCTCCTG ATGGCCCCAT TACTGCTTAT 60
GACATCTTCT CAGGCACCAC CCTAGCTCGC TTCTCTGGCA GCAGGTCACC ACGCCATGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027295--Quinoprotein_ADH-like_fam
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0001s39280g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043397	Glycine max	53.82	2.00e-92	332.00
IUUC-Lpe-051359	Leersia perrieri	40.67	2.00e-40	159.00
IUUC-Mtr-058361	Medicago truncatula	53.01	1.00e-89	323.00
IUUC-Mac-064646	Musa acuminata	49.06	1.00e-65	243.00
IUUC-Oin-080068	Oryza indica	36.78	1.00e-38	153.00
IUUC-Opu-083553	Oryza punctata	34.54	2.00e-30	126.00
IUUC-Ppe-101774	Prunus persica	63.69	9.00e-123	432.00
IUUC-Sit-110647	Setaria italica	40.39	3.00e-38	152.00
IUUC-Tca-120937	Theobroma cacao	63.23	2.00e-116	411.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence