iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005474

UUCD1 version

UUC-ArL-00760

Ensembl Protein ID

fgenesh1_pm.C_scaffold_8000449

UniProt Accession

D7MQR8; D7MQR8_ARALL

Genbank Protein ID

EFH39974.1

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348720

Gene Name

ARALYDRAFT_331106

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pm.C_scaffold_8000449	fgenesh1_pm.C_scaffold_8000449	fgenesh1_pm.C_scaffold_8000449

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-07	32.6	628	669

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++   +d   +l CgH fh +C++ w       +++ +CP+C+
   Q: 628  CCICQEEYnegED-MGTLECGHEFHSQCIKEW------LKQKNLCPICK 669
           ********66544.8899**************......99********6 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MQGERASLGY LSEALNFEHG SSSSNGVIDH WENIHSLGDN DLQDYMIANS ESNTSLTNSV 60
YCEQQGLRRF SLGEASSSGT KDEASSHNEQ RMETRCFDGR RNEIIDLDPV FAQPSGTNQP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGGGGG AGAGGGCCAG TCTTGGCTAT TTATCAGAGG CCTTGAACTT TGAGCATGGT 60
TCTTCTTCGA GTAATGGTGT GATAGATCAT TGGGAGAATA TTCACAGTCT TGGTGATAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_331106

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002953	Amborella trichopoda	48.08	4.00e-41	161.00
IUUC-Ath-006794	Arabidopsis thaliana	90.45	0.00e+00	1152.00
IUUC-Bdi-014368	Brachypodium distachyon	52.85	2.00e-50	193.00
IUUC-Bol-015553	Brassica oleracea	70.17	0.00e+00	778.00
IUUC-Bra-017121	Brassica rapa	66.62	0.00e+00	765.00
IUUC-Mtr-057649	Medicago truncatula	38.57	6.00e-87	314.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence