iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099830

UUCD1 version

UUC-PoT-01107

Ensembl Protein ID

POPTR_0005s24970.2

UniProt Accession

B9H4C0; B9H4C0_POPTR

Genbank Protein ID

EEE93868.1; ERP61506.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000341; CM000341

Gene Name

POPTRDRAFT_559734; POPTR_0005s24970g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s24970	POPTR_0005s24970.2	POPTR_0005s24970.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.30e-27	96.8	259	330

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +p ef CpIs  lM dPv+++sG ty+r  Iekw+++g++tcP+t+ +l++ +l+Pn +++ li++wc+ ++
   Q: 259  PPIEFECPISTRLMYDPVIIASGKTYERVWIEKWFSEGHETCPMTNIRLENLSLTPNVAMKGLISKWCSLHE 330
           799*****************************************************************9876 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGKDRAKDVE LPSCFSVKVH RSMCLELKNF VDRISQIYPA IESARPRCSS GVQALCSLVV 60
NMDTAKLLIQ HCANSSKLYL AITAERILLK CKRIQNALDL CLGQIQNVVP PFLAAKISGI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTCTCTCTC TCTCTCTCTG TTGTTTTTTC GTCCACCTTT CATGTGGTGG AAGTTGTTTC 60
GTTGACTCCG TTTGAAATTT CAACTTGCTA GAAGTTACTG CTCTTCTTCT TTAGTTAAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0005s24970g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Tca-120989	Theobroma cacao	48.51	6.00e-165	573.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence