iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114356

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G021500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g002050	Sb10g002050.1	Sb10g002050.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-18	66.2	353	383

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H++s +++ f sd +l++s+s D t+ +WDl
   Q: 353  HSASCNAVTFsSDcKLMASCSADTTVALWDL 383
           99999******999****************7 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAGLERPRRR PPPDPVAVLR GHRAAVNDAC FHPSLPLLFS GAADGELRAW DTASHRTASS 60
VWAHAGSAGV YSVAAGAGLG NKIISQGRDG TCKCWVIEEA GLSRKPLFTV KTSTYHFCKM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGGCC TCGAACGGCC CCGCCGCCGC CCTCCCCCGG ACCCCGTCGC CGTGCTCCGC 60
GGCCACCGCG CCGCAGTCAA CGACGCCTGC TTCCATCCCT CCCTCCCACT CCTCTTCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0048700--P:acquisition of desiccation tolerance in seed
GO:0006974--P:cellular response to DNA damage stimulus
GO:0031570--P:DNA integrity checkpoint
GO:0009793--P:embryo development ending in seed dormancy
GO:0048481--P:plant ovule development
GO:0009663--P:plasmodesma organization
GO:0010497--P:plasmodesmata-mediated intercellular transport
GO:0009555--P:pollen development
GO:0071158--P:positive regulation of cell cycle arrest
GO:0006282--P:regulation of DNA repair
GO:2000280--P:regulation of root development
GO:0010044--P:response to aluminum ion
GO:0072718--P:response to cisplatin

KEGG

sbi:SORBI_10g002050

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000703	Aegilops tauschii	66.84	2.00e-147	514.00
IUUC-Aml-001556	Ailuropoda melanoleuca	27.53	1.00e-30	125.00
IUUC-Atr-002691	Amborella trichopoda	53.42	1.00e-119	422.00
IUUC-Apl-003227	Anas platyrhynchos	27.75	2.00e-30	125.00
IUUC-Aly-006168	Arabidopsis lyrata	56.88	6.00e-125	439.00
IUUC-Ath-007145	Arabidopsis thaliana	55.35	4.00e-121	426.00
IUUC-Acl-008132	Aspergillus clavatus	27.14	4.00e-13	68.60
IUUC-Afl-008655	Aspergillus flavus	27.09	7.00e-23	100.00
IUUC-Afu-008778	Aspergillus fumigatus	25.56	2.00e-19	89.40
IUUC-Ang-009760	Aspergillus niger	28.46	9.00e-21	94.00
IUUC-Bgr-012119	Blumeria graminis	27.59	2.00e-22	99.00
IUUC-Bta-012556	Bos taurus	28.46	4.00e-31	127.00
IUUC-Bdi-014151	Brachypodium distachyon	76.67	8.00e-170	588.00
IUUC-Bol-016319	Brassica oleracea	56.61	1.00e-125	441.00
IUUC-Bra-016675	Brassica rapa	56.28	4.00e-124	436.00
IUUC-Cja-019523	Callithrix jacchus	28.15	4.00e-31	127.00
IUUC-Cfa-021217	Canis familiaris	34.93	2.00e-29	122.00
IUUC-Cpo-021506	Cavia porcellus	27.93	2.00e-28	119.00
IUUC-Csa-023674	Chlorocebus sabaeus	28.15	4.00e-32	130.00
IUUC-Cgl-026723	Colletotrichum gloeosporioides	24.29	9.00e-14	70.50
IUUC-Dre-027592	Danio rerio	28.31	3.00e-31	128.00
IUUC-Dno-029880	Dasypus novemcinctus	35.07	1.00e-27	115.00
IUUC-Dor-030266	Dipodomys ordii	39.46	1.00e-24	105.00
IUUC-Dse-031212	Dothistroma septosporum	27.73	8.00e-22	97.10
IUUC-Dme-032209	Drosophila melanogaster	27.03	1.00e-23	102.00
IUUC-Eca-033371	Equus caballus	27.27	2.00e-31	128.00
IUUC-Fca-035558	Felis catus	26.75	1.00e-30	126.00
IUUC-Fal-036794	Ficedula albicollis	28.68	7.00e-36	143.00
IUUC-Gmo-038742	Gadus morhua	26.32	1.00e-29	122.00
IUUC-Gga-040868	Gallus gallus	28.08	9.00e-33	133.00
IUUC-Gac-041646	Gasterosteus aculeatus	26.79	2.00e-34	138.00
IUUC-Gma-044269	Glycine max	55.27	6.00e-124	436.00
IUUC-Ggo-044553	Gorilla gorilla	28.15	2.00e-31	128.00
IUUC-Hsa-046217	Homo sapiens	28.15	4.00e-31	127.00
IUUC-Hvu-047647	Hordeum vulgare	75.33	3.00e-170	590.00
IUUC-Itr-048649	Ictidomys tridecemlineatus	27.96	7.00e-33	133.00
IUUC-Lch-050134	Latimeria chalumnae	28.27	7.00e-33	133.00
IUUC-Lpe-051524	Leersia perrieri	64.02	2.00e-130	457.00
IUUC-Loc-051757	Lepisosteus oculatus	28.01	2.00e-30	125.00
IUUC-Laf-053733	Loxodonta africana	33.65	3.00e-28	118.00
IUUC-Mcc-055477	Macaca mulatta	26.10	3.00e-23	101.00
IUUC-Meu-056758	Macropus eugenii	45.59	8.00e-13	66.60
IUUC-Mor-057289	Magnaporthe oryzae	47.46	5.00e-10	58.20
IUUC-Mtr-058616	Medicago truncatula	56.38	2.00e-118	417.00
IUUC-Mga-059637	Meleagris gallopavo	23.97	1.00e-13	68.90
IUUC-Mvi-060385	Microbotryum violaceum	22.30	2.00e-15	75.90
IUUC-Mmr-061675	Microcebus murinus	26.91	6.00e-30	124.00
IUUC-Mdo-062782	Monodelphis domestica	29.40	5.00e-31	127.00
IUUC-Mmu-064058	Mus musculus	28.99	2.00e-36	145.00
IUUC-Mac-065262	Musa acuminata	60.16	5.00e-138	483.00
IUUC-Mpu-066633	Mustela putorius furo	35.41	5.00e-25	108.00
IUUC-Mlu-067333	Myotis lucifugus	34.45	1.00e-28	119.00
IUUC-Nfi-068581	Neosartorya fischeri	25.13	6.00e-20	91.30
IUUC-Ncr-068680	Neurospora crassa	25.42	3.00e-08	52.80
IUUC-Nle-069485	Nomascus leucogenys	31.92	2.00e-28	119.00
IUUC-Oan-073361	Ornithorhynchus anatinus	34.07	2.00e-22	98.60
IUUC-Ocu-073923	Oryctolagus cuniculus	26.81	3.00e-24	105.00
IUUC-Oba-075743	Oryza barthii	65.23	5.00e-149	519.00
IUUC-Obr-076879	Oryza brachyantha	72.66	1.00e-156	544.00
IUUC-Ogl-077813	Oryza glaberrima	73.30	2.00e-162	564.00
IUUC-Ogu-078196	Oryza glumaepatula	65.23	5.00e-149	519.00
IUUC-Oin-080131	Oryza indica	73.56	3.00e-163	566.00
IUUC-Olo-080613	Oryza longistaminata	58.84	7.00e-90	322.00
IUUC-Ome-081912	Oryza meridionalis	66.67	3.00e-149	520.00
IUUC-Oni-082813	Oryza nivara	65.93	2.00e-148	517.00
IUUC-Opu-083663	Oryza punctata	73.01	7.00e-167	578.00
IUUC-Oru-085102	Oryza rufipogon	66.92	4.00e-149	520.00
IUUC-Osa-086204	Oryza sativa	73.56	3.00e-163	566.00
IUUC-Ola-086541	Oryzias latipes	30.47	2.00e-32	132.00
IUUC-Olu-087776	Ostreococcus lucimarinus	31.58	2.00e-15	74.70
IUUC-Oga-088039	Otolemur garnettii	27.42	2.00e-31	128.00
IUUC-Oar-089704	Ovis aries	49.40	7.00e-20	87.00
IUUC-Ptr-091291	Pan troglodytes	28.15	2.00e-31	128.00
IUUC-Pan-092644	Papio anubis	27.88	2.00e-31	129.00
IUUC-Psi-093646	Pelodiscus sinensis	28.27	2.00e-33	135.00
IUUC-Ppa-095698	Physcomitrella patens	40.37	2.00e-79	288.00
IUUC-Pfo-096601	Poecilia formosa	27.97	3.00e-33	134.00
IUUC-Pab-098407	Pongo abelii	28.42	2.00e-31	128.00
IUUC-Pop-099193	Populus trichocarpa	55.73	3.00e-126	444.00
IUUC-Pca-100366	Procavia capensis	26.63	3.00e-29	121.00
IUUC-Ppe-101608	Prunus persica	55.84	6.00e-127	446.00
IUUC-Pva-102775	Pteropus vampyrus	31.92	1.00e-26	113.00
IUUC-Rno-105626	Rattus norvegicus	28.42	2.00e-34	138.00
IUUC-Sha-106539	Sarcophilus harrisii	30.45	1.00e-30	126.00
IUUC-Sja-107694	Schizosaccharomyces japonicus	26.55	9.00e-19	87.00
IUUC-Spo-108326	Schizosaccharomyces pombe	26.13	7.00e-18	84.00
IUUC-Smo-108756	Selaginella moellendorffii	42.86	1.00e-86	312.00
IUUC-Sit-109771	Setaria italica	85.60	0.00e+00	672.00
IUUC-Sly-111138	Solanum lycopersicum	55.20	3.00e-124	437.00
IUUC-Stu-112425	Solanum tuberosum	54.93	1.00e-122	431.00
IUUC-Ssc-115256	Sus scrofa	39.86	2.00e-27	115.00
IUUC-Tgu-116774	Taeniopygia guttata	26.63	4.00e-25	107.00
IUUC-Tru-117900	Takifugu rubripes	34.47	1.00e-26	112.00
IUUC-Tsy-119540	Tarsius syrichta	50.65	4.00e-18	84.00
IUUC-Tni-120252	Tetraodon nigroviridis	26.79	3.00e-35	141.00
IUUC-Tca-121717	Theobroma cacao	53.87	9.00e-127	445.00
IUUC-Tre-122069	Trichoderma reesei	23.22	2.00e-10	59.30
IUUC-Tvi-122673	Trichoderma virens	22.86	2.00e-12	66.20
IUUC-Tae-124693	Triticum aestivum	74.93	3.00e-164	570.00
IUUC-Tme-127222	Tuber melanosporum	25.00	5.00e-15	74.30
IUUC-Ttr-129240	Tursiops truncatus	35.98	3.00e-25	108.00
IUUC-Vda-129913	Verticillium dahliae	25.68	4.00e-14	71.60
IUUC-Vvi-131718	Vitis vinifera	56.50	4.00e-128	450.00
IUUC-Xtr-132109	Xenopus tropicalis	30.00	8.00e-37	146.00
IUUC-Xma-133366	Xiphophorus maculatus	28.76	9.00e-35	139.00
IUUC-Zma-135563	Zea mays	81.75	0.00e+00	650.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence