iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098822

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000341

Gene Name

POPTRDRAFT_761537; POPTR_0005s26590g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s26590	POPTR_0005s26590.1	POPTR_0005s26590.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.80e-08	34.2	114	156

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+d+  ++  + +p C+H fh++C   w        k+  CP+Cr
   Q: 114  CAVCLDDIesEQVARMVPgCNHGFHLECADTW------LTKRPVCPVCR 156
           ********54333555667*************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MRHGVYNTPF TPPPIHSPTP SPTPLNFNPT TTNTASAVTS GHNMLVSVFL ALFLPCAGMS 60
AVFIVYICLL WYTANNQPEI RLPVKTVTEK GLSSSELEKL PKVTGKELVL GTECAVCLDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGCCATG GTGTGTACAA CACACCCTTC ACACCGCCTC CTATTCACTC TCCCACTCCA 60
TCACCAACCC CCTTGAACTT CAACCCCACA ACCACCAACA CCGCCTCTGC CGTCACCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0005s26590g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-042987	Glycine max	74.42	6.00e-52	195.00
IUUC-Mtr-058369	Medicago truncatula	64.29	2.00e-45	173.00
IUUC-Ppe-101352	Prunus persica	72.50	3.00e-48	182.00
IUUC-Sly-111161	Solanum lycopersicum	69.42	3.00e-47	179.00
IUUC-Stu-112592	Solanum tuberosum	71.07	1.00e-47	181.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence