iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.2__1924__AT1G76390.2	fgenesh2_kg.2__1924__AT1G76390.2	fgenesh2_kg.2__1924__AT1G76390.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.00e-26	91.6	25	101

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceens 73
           ++e+f+Cp+++++M++Pv+l++G+t++r++Iekw++++++     +cP+t+++l+ +dl P+++lr++i++w+++n+
   Q: 25   IYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECREngqplSCPITSKQLSITDLSPSIALRNTIEEWRARND 101
           799********************************998888899******************************997 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MAGSGSWDGS QSDNSSQFEP GIDNIYEAFI CPLTKQVMHN PVTLENGQTF EREAIEKWFQ 60
ECRENGQPLS CPITSKQLSI TDLSPSIALR NTIEEWRARN DALKLDIARQ SLYLGNAETN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCTTTTTTC CTCCGGTCTC AAATTCAGGC AAAAATATCT CTTTCGGATT CATACTTGAG 60
ACAAGAGTAG AAACACCGAT GTTGTGTACA TAGAATTAAT TCGATTTAAC ACGTTTTCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR001263--PInositide-3_kin_accessory_dom
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005886--C:plasma membrane
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

aly:ARALYDRAFT_476794

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000143	Aegilops tauschii	58.47	0.00e+00	867.00
IUUC-Atr-002916	Amborella trichopoda	57.39	0.00e+00	865.00
IUUC-Ath-007569	Arabidopsis thaliana	96.30	0.00e+00	1515.00
IUUC-Bdi-014487	Brachypodium distachyon	56.98	0.00e+00	852.00
IUUC-Bra-017841	Brassica rapa	86.07	0.00e+00	1332.00
IUUC-Gma-044318	Glycine max	65.23	0.00e+00	1037.00
IUUC-Hvu-047783	Hordeum vulgare	58.84	0.00e+00	877.00
IUUC-Mtr-058511	Medicago truncatula	65.72	0.00e+00	1019.00
IUUC-Mac-064911	Musa acuminata	54.71	0.00e+00	818.00
IUUC-Obr-076103	Oryza brachyantha	58.49	0.00e+00	827.00
IUUC-Ppa-096021	Physcomitrella patens	45.34	0.00e+00	672.00
IUUC-Pop-099966	Populus trichocarpa	67.74	0.00e+00	1041.00
IUUC-Ppe-101973	Prunus persica	64.89	0.00e+00	1001.00
IUUC-Smo-109219	Selaginella moellendorffii	44.79	0.00e+00	633.00
IUUC-Sit-110490	Setaria italica	58.17	0.00e+00	850.00
IUUC-Tca-121113	Theobroma cacao	67.81	0.00e+00	1082.00
IUUC-Tur-126573	Triticum urartu	58.22	0.00e+00	867.00
IUUC-Vvi-131623	Vitis vinifera	65.89	0.00e+00	1065.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence