iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121756

Ensembl Protein ID

EOY15433

UniProt Accession

A0A061FEU0; A0A061FEU0_THECC

Genbank Protein ID

EOY15433.1

Protein Name

Ubiquitin-specific protease 16, putative isoform 2

Genbank Nucleotide ID

CM001886

Gene Name

TCM_034494

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_034494	EOY15433	EOY15433
TCM_034494	EOY15432	EOY15432

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	6.50e-74	250.1	597	902

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEflafll 100
           +Gl N gN+CY N+vLQcL+++p+l+ ++l+  ++++++     +++ ++++++++l+ +  k+ k+  sp  +l++l+++ +++ + +++Da+Efl++ +
   Q: 597  CGLVNCGNSCYANAVLQCLTFTPPLTAYFLQgLHSKACA-----KKEWCFSCEFENLILKA-KDGKSPLSPIGILSQLQNIGSQLANGKEEDAHEFLRYAI 691
           7******************************55666665.....4578**********988.99999********************************** PP
   S: 101  dqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLesftkeeele 201
           d++++ +         +e + d        ++   +++++l+  +F+g l+s+ikc +c+ +s+r+e ++dl+++++g+      +l+++L+ ft++e l+
   Q: 692  DAMQSVC--------LREAGVD--------SSGCSEEETTLVGLTFGGYLRSKIKCMKCQGKSERHERMMDLTVEIEGDIG----TLEEALRRFTATEILD 772
           *******........4454555........4456677899****************************************5....8*************** PP
   S: 202  genkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsG...slssGHYvayv 299
           genky+c++ck++ +a+kkl++ + P+vL++ LkRf   ++ ++  k+nk + fp+ L+l+p+++ +++k   + +Y+L++vvvH      + sGHYv+yv
   Q: 773  GENKYQCSRCKSYEKAKKKLTILEAPNVLTIALKRF---QS-GKFGKLNKAIRFPEILNLAPYMSGTSDK---SPIYRLYGVVVHLDimnAAFSGHYVCYV 866
           ************************************...33.4557********************6655...79**********873325569******* PP
   S: 300  knekgkWllfdDskVtevke.eevleetgstaYvlfYkr 337
           kn ++kW+++dDs+V ++ e e+vl+   + aY+l+Y r
   Q: 867  KNVQNKWFKIDDSTVVTSAElERVLT---KGAYMLLYAR 902
           **************988876699999...********87 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MLLAGDLGIS SLVLVVSLVL PLIGLFIRRK WRLSVARQAE IKRLLILASE EAARAELESL 60
LGYGTISVSR NYHQCAICFC PTTTRCARCK AVRYCSAKCQ IIHWRQGHKE ECHPPSIATH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTATTGGTGA GATTAGGAGG CTAGGGTTTG CTGATTCCGT TGGATGCCTA TTGGGTGCAG 60
GATAAATGCT TCTTGCCGGG GATCTAGGGA TTTCGAGCCT TGTCCTTGTG GTCTCCCTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0472--Membrane
KW-0645--Protease
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008283--P:cell proliferation
GO:0009908--P:flower development
GO:0048366--P:leaf development
GO:0016579--P:protein deubiquitination
GO:1901000--P:regulation of response to salt stress
GO:0009651--P:response to salt stress
GO:0048364--P:root development
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002920	Amborella trichopoda	72.39	3.00e-168	585.00
IUUC-Aly-005811	Arabidopsis lyrata	46.49	0.00e+00	695.00
IUUC-Ath-006972	Arabidopsis thaliana	52.13	4.00e-165	574.00
IUUC-Bdi-014317	Brachypodium distachyon	67.02	1.00e-149	523.00
IUUC-Bol-015264	Brassica oleracea	47.10	0.00e+00	659.00
IUUC-Bra-018079	Brassica rapa	46.53	0.00e+00	660.00
IUUC-Gma-044069	Glycine max	53.65	0.00e+00	847.00
IUUC-Hvu-047748	Hordeum vulgare	63.66	4.00e-141	494.00
IUUC-Lpe-051561	Leersia perrieri	66.04	7.00e-143	500.00
IUUC-Mtr-058629	Medicago truncatula	49.91	0.00e+00	803.00
IUUC-Mac-065141	Musa acuminata	55.27	2.00e-161	562.00
IUUC-Oba-075163	Oryza barthii	65.51	4.00e-143	501.00
IUUC-Obr-076357	Oryza brachyantha	66.39	2.00e-146	512.00
IUUC-Ogl-077565	Oryza glaberrima	65.51	5.00e-143	501.00
IUUC-Ogu-078443	Oryza glumaepatula	65.51	3.00e-143	502.00
IUUC-Oin-079111	Oryza indica	67.22	3.00e-145	508.00
IUUC-Olo-080489	Oryza longistaminata	62.72	4.00e-140	491.00
IUUC-Ome-081510	Oryza meridionalis	64.89	8.00e-143	500.00
IUUC-Oni-082570	Oryza nivara	65.51	5.00e-143	501.00
IUUC-Opu-084076	Oryza punctata	65.78	7.00e-144	504.00
IUUC-Oru-084237	Oryza rufipogon	65.51	5.00e-143	501.00
IUUC-Osa-085297	Oryza sativa	65.51	5.00e-143	501.00
IUUC-Pop-099860	Populus trichocarpa	55.56	0.00e+00	959.00
IUUC-Ppe-101801	Prunus persica	57.19	0.00e+00	968.00
IUUC-Sly-111806	Solanum lycopersicum	69.48	5.00e-176	610.00
IUUC-Tur-126736	Triticum urartu	65.68	2.00e-146	512.00
IUUC-Vvi-130946	Vitis vinifera	53.26	0.00e+00	1045.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence