iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121572

Ensembl Protein ID

EOY15480

UniProt Accession

A0A061FDR7; A0A061FDR7_THECC

Genbank Protein ID

EOY15478.1; EOY15479.1; EOY15480.1

Protein Name

WD40 and Beach domain-containing protein isoform 1

Genbank Nucleotide ID

CM001886; CM001886; CM001886

Gene Name

TCM_034527

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_034527	EOY15480	EOY15480
TCM_034527	EOY15481	EOY15481

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-10	40.4	3025	3056

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           +H+d v+c+a   d  +l++Gs+D t++vW++
   Q: 3025 QHKDVVSCVAVtADgSILATGSYDTTVMVWEV 3056
           5**********955599*************97 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MNIVKGVADL IRRTSSGQTG DSPGAQGERL SLPTPRICFS EVDDEAVLST LWERYENTVD 60
KVEKKKLFQV FLKQFLTVFK NWEPVNGGQL PEAASTTVQA AEYSTSVNDV VVGCSAGHPA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCGAAAGAAG CTGAAGAAAA CCATTAGAAC CCAGATCTTG TATCGTAAAC CCTAGAAGAA 60
CGTCAGGCGT TTGATCTGAT CAGGTATTTT TATCTTCCAT AATCGGCGAC TGCTTTATTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000409--BEACH_dom
IPR013320--ConA-like_dom
IPR031570--DUF4704
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02138--Beach
PF15787--DUF4704
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000860	Aegilops tauschii	60.02	0.00e+00	2084.00
IUUC-Aml-001205	Ailuropoda melanoleuca	38.44	3.00e-138	486.00
IUUC-Atr-002998	Amborella trichopoda	62.11	0.00e+00	3968.00
IUUC-Apl-004130	Anas platyrhynchos	38.90	8.00e-143	502.00
IUUC-Aca-005124	Anolis carolinensis	34.22	2.00e-152	533.00
IUUC-Aly-005407	Arabidopsis lyrata	73.42	0.00e+00	1955.00
IUUC-Ath-007674	Arabidopsis thaliana	70.00	0.00e+00	3670.00
IUUC-Bta-012509	Bos taurus	33.24	1.00e-147	518.00
IUUC-Bdi-014244	Brachypodium distachyon	58.43	0.00e+00	2243.00
IUUC-Bol-015261	Brassica oleracea	68.42	0.00e+00	3562.00
IUUC-Bra-016877	Brassica rapa	69.44	0.00e+00	3580.00
IUUC-Cja-018744	Callithrix jacchus	39.17	3.00e-146	511.00
IUUC-Cfa-020786	Canis familiaris	34.54	3.00e-149	523.00
IUUC-Cpo-021636	Cavia porcellus	33.53	1.00e-142	501.00
IUUC-Csa-023251	Chlorocebus sabaeus	38.89	4.00e-140	493.00
IUUC-Csv-026337	Ciona savignyi	33.38	2.00e-116	412.00
IUUC-Dno-029573	Dasypus novemcinctus	38.25	6.00e-139	489.00
IUUC-Dme-031593	Drosophila melanogaster	38.40	6.00e-137	482.00
IUUC-Ete-032481	Echinops telfairi	37.97	8.00e-126	445.00
IUUC-Eca-033893	Equus caballus	34.34	7.00e-149	522.00
IUUC-Eeu-034829	Erinaceus europaeus	29.43	7.00e-75	275.00
IUUC-Fal-036871	Ficedula albicollis	33.33	7.00e-154	538.00
IUUC-Gmo-039388	Gadus morhua	38.77	6.00e-137	482.00
IUUC-Gga-041206	Gallus gallus	34.44	7.00e-152	532.00
IUUC-Gac-042518	Gasterosteus aculeatus	38.99	3.00e-139	490.00
IUUC-Gma-042772	Glycine max	69.55	0.00e+00	4528.00
IUUC-Ggo-045255	Gorilla gorilla	38.44	5.00e-131	461.00
IUUC-Hsa-046316	Homo sapiens	38.94	2.00e-139	490.00
IUUC-Hvu-047772	Hordeum vulgare	60.83	0.00e+00	1899.00
IUUC-Itr-048852	Ictidomys tridecemlineatus	34.05	2.00e-146	514.00
IUUC-Lch-050027	Latimeria chalumnae	40.24	5.00e-145	507.00
IUUC-Lpe-050958	Leersia perrieri	56.87	0.00e+00	2257.00
IUUC-Loc-052771	Lepisosteus oculatus	39.84	8.00e-149	521.00
IUUC-Laf-053724	Loxodonta africana	33.92	4.00e-148	519.00
IUUC-Mcc-055200	Macaca mulatta	39.17	2.00e-146	512.00
IUUC-Mtr-058372	Medicago truncatula	69.22	0.00e+00	4384.00
IUUC-Mga-059851	Meleagris gallopavo	36.63	4.00e-151	528.00
IUUC-Mmr-061112	Microcebus murinus	34.31	4.00e-148	520.00
IUUC-Mdo-062727	Monodelphis domestica	35.10	5.00e-151	529.00
IUUC-Mmu-064194	Mus musculus	39.06	7.00e-147	513.00
IUUC-Mac-064991	Musa acuminata	60.47	0.00e+00	3829.00
IUUC-Mpu-066074	Mustela putorius furo	34.64	2.00e-149	524.00
IUUC-Mlu-067308	Myotis lucifugus	34.43	3.00e-146	513.00
IUUC-Nle-069582	Nomascus leucogenys	38.81	1.00e-139	491.00
IUUC-Ont-071396	Oreochromis niloticus	37.38	7.00e-142	499.00
IUUC-Oan-073413	Ornithorhynchus anatinus	39.28	2.00e-146	511.00
IUUC-Ocu-074483	Oryctolagus cuniculus	33.75	5.00e-142	498.00
IUUC-Oba-075361	Oryza barthii	53.46	0.00e+00	3075.00
IUUC-Obr-076854	Oryza brachyantha	57.34	0.00e+00	3429.00
IUUC-Ogl-077620	Oryza glaberrima	67.68	0.00e+00	1452.00
IUUC-Ogu-077973	Oryza glumaepatula	48.14	0.00e+00	1952.00
IUUC-Oin-079746	Oryza indica	51.53	0.00e+00	3106.00
IUUC-Olo-080417	Oryza longistaminata	54.40	0.00e+00	3225.00
IUUC-Ome-081391	Oryza meridionalis	54.66	0.00e+00	3318.00
IUUC-Oni-082062	Oryza nivara	53.35	0.00e+00	3067.00
IUUC-Opu-083178	Oryza punctata	55.28	0.00e+00	3263.00
IUUC-Oru-084803	Oryza rufipogon	53.10	0.00e+00	3073.00
IUUC-Osa-085645	Oryza sativa	66.93	1.00e-105	374.00
IUUC-Ola-087242	Oryzias latipes	39.37	1.00e-150	526.00
IUUC-Olu-087890	Ostreococcus lucimarinus	39.63	2.00e-146	512.00
IUUC-Oga-088409	Otolemur garnettii	34.48	9.00e-150	524.00
IUUC-Oar-089217	Ovis aries	34.15	8.00e-148	518.00
IUUC-Psi-093570	Pelodiscus sinensis	37.45	1.00e-137	484.00
IUUC-Ppa-095295	Physcomitrella patens	46.79	0.00e+00	2298.00
IUUC-Pfo-096377	Poecilia formosa	38.34	1.00e-139	491.00
IUUC-Pab-098101	Pongo abelii	38.81	1.00e-139	490.00
IUUC-Pop-099604	Populus trichocarpa	75.16	0.00e+00	4704.00
IUUC-Ppe-101836	Prunus persica	78.05	0.00e+00	3085.00
IUUC-Pva-102558	Pteropus vampyrus	38.69	9.00e-137	481.00
IUUC-Rno-104971	Rattus norvegicus	39.06	2.00e-146	512.00
IUUC-Sha-107387	Sarcophilus harrisii	34.77	2.00e-149	523.00
IUUC-Smo-108699	Selaginella moellendorffii	34.87	0.00e+00	976.00
IUUC-Sit-110075	Setaria italica	63.33	0.00e+00	2223.00
IUUC-Sly-111033	Solanum lycopersicum	73.49	0.00e+00	2412.00
IUUC-Sbi-114049	Sorghum bicolor	54.73	0.00e+00	2128.00
IUUC-Tgu-117304	Taeniopygia guttata	33.15	5.00e-154	539.00
IUUC-Tru-118125	Takifugu rubripes	39.01	2.00e-141	497.00
IUUC-Tni-120239	Tetraodon nigroviridis	37.90	6.00e-142	498.00
IUUC-Tae-124172	Triticum aestivum	50.71	0.00e+00	2339.00
IUUC-Tur-126212	Triticum urartu	60.70	0.00e+00	1857.00
IUUC-Ttr-128452	Tursiops truncatus	36.02	1.00e-147	518.00
IUUC-Vvi-130860	Vitis vinifera	74.24	0.00e+00	4704.00
IUUC-Xtr-132038	Xenopus tropicalis	37.63	7.00e-134	472.00
IUUC-Xma-133712	Xiphophorus maculatus	37.80	2.00e-141	497.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence