iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099973

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_551342; POPTR_0002s07130g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s07130	POPTR_0002s07130.1	POPTR_0002s07130.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.90e-29	101.1	10	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           vp+ f+CpIsl++M+ Pv l++G+tydrssI+ wl+sg+ tcP t+q l+++d+vPnltl+rli+ w  + 
   Q: 10   VPSLFRCPISLDVMKSPVSLCTGVTYDRSSIQHWLDSGHDTCPATMQILSSKDFVPNLTLHRLINLWTTTA 80
           89*****************************************************************9886 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGRDELFLTV PSLFRCPISL DVMKSPVSLC TGVTYDRSSI QHWLDSGHDT CPATMQILSS 60
KDFVPNLTLH RLINLWTTTA ATKSSALAPA VSEEKVRVWI EEIKSGKIER CLDSIVEFVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCAGAAGAA TGGGGAGAGA CGAACTCTTC CTAACTGTAC CCAGCCTCTT TCGCTGTCCG 60
ATCTCTCTCG ACGTAATGAA GTCTCCCGTA AGTCTCTGCA CCGGCGTCAC ATACGATCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0002s07130g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-042673	Glycine max	48.56	1.00e-73	269.00
IUUC-Lpe-050922	Leersia perrieri	68.97	2.00e-21	96.30
IUUC-Ogl-077245	Oryza glaberrima	68.97	2.00e-21	96.70
IUUC-Ppe-101597	Prunus persica	53.83	8.00e-111	393.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence