• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Ath-007334
UUCD1 version UUC-ArT-01715
Ensembl Protein ID AT2G24640.1
UniProt Accession Q9SJA1; Q9C5D8; UBP19_ARATH
Genbank Protein ID AAD23896.2; AEC07607.1; AAK26025.1; AAL07252.1
Protein Name Ubiquitin carboxyl-terminal hydrolase 19; Deubiquitinating enzyme 19; Ubiquitin thioesterase 19; Ubiquitin-specific-processing protease 19
Genbank Nucleotide ID AC006954; CP002685; AF360315; AY056366
Gene Name UBP19; At2g24640; F25P17.6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT2G24640 AT2G24640.1 AT2G24640.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
DUB/USP 2.60e-71 241.4 174 479
Active Site
Position(s) Description Evidence
183 Nucleophile ECO:0000255|PROSITE-ProRule:PRU10092}
439 Proton acceptor ECO:0000255|PROSITE-ProRule:PRU10092}
Domain Profile

   DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEfla 97
    +Gl+N gN+C+ N vLQcLs +++l +lle +k++++++ + ++l+++++ + ++++ +sp ++++ l ++ ++ +q+Da+E+++
   Q: 174 CGLTNCGNSCFANVVLQCLSWTRPLVAYLLErGHKRECRRN-----DWCFLCEFENHLDRA-NYSRFPFSPMNIISRLPNIGGNLGYGRQEDAHELMR 265
    7******************************7778888776.....56**********999.88999******************************* PP
   S: 98 flldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLesft 195
    f +d +++ + +e++ + + + ++++li+ +F+g l+sq++c +c nvs ++e+++dl+++++g+ sl++cL++ft
   Q: 266 FAIDMMQSVC--------LDEFGGE-------KVVPPRAQETTLIQYIFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAV----SLEECLDQFT 344
    **********........3444444.......67899999*******************************************7....8********* PP
   S: 196 keeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsGslss. 292
    ++e l+g+n y+c++c+++++a k+l+++ P++L++ LkRf ++++ k+nk+++fp+++dl p+++ e+ ++ Y+L+av+vH l+
   Q: 345 AKEWLQGDNLYKCDRCDDYVKACKRLSIRCAPNILTIALKRF----QGGRFGKLNKRISFPETFDLGPYMSGGGEG---SDVYKLYAVIVHLDMLNAs 435
    ******************************************....567889********************6655...79**********9955544 PP
   S: 293 ..GHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
    GHY++yvk+ +g+W+++dDs+V++v+ e+vl+ + aY+l+Y r
   Q: 436 ffGHYICYVKDFRGNWYRIDDSEVEKVELEDVLS---QRAYMLLYSR 479
    55********************************...9*******87 PP
   

Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description



     Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins (By similarity).
Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins (By similarity).
Protein Sequence
(Fasta)
MHEVGLFVDL NSFTQLILTL FFVSIGLLYF VKRTAAKYFE VGGGSGGFDR DHRRDFMVSD 60
TAECSVCGKA TTKKCSRCKS VRYCSAACQT SDWKSGHKLK CKGFRSTDSS PVRRDDIDFE 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ath-007334|DUB,USP|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AAAACACAGA GCAAAGAAAA AACAGAGGAG GTTGATTCTC TTTGGCATCT CCGAATCGAA 60
TCTGAGAAGA GAAGAGGAAG AAAAACGAAG ATCGATGTTC GAGAGGGAAT TAGATGCATG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ath-007334|DUB,USP|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0025--Alternative splicing
KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0472--Membrane
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG ath:AT2G24640
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001055 Aegilops tauschii 64.75 7.00e-141 494.00
IUUC-Atr-002997 Amborella trichopoda 50.68 2.00e-163 568.00
IUUC-Aly-005942 Arabidopsis lyrata 93.18 0.00e+00 1171.00
IUUC-Bdi-014660 Brachypodium distachyon 60.32 7.00e-154 537.00
IUUC-Bol-015083 Brassica oleracea 80.78 0.00e+00 980.00
IUUC-Bra-017569 Brassica rapa 79.82 0.00e+00 975.00
IUUC-Cel-018627 Caenorhabditis elegans 29.11 3.00e-31 129.00
IUUC-Gma-042920 Glycine max 64.68 0.00e+00 677.00
IUUC-Hvu-047620 Hordeum vulgare 62.88 6.00e-159 554.00
IUUC-Lpe-051385 Leersia perrieri 56.47 4.00e-131 461.00
IUUC-Mtr-057748 Medicago truncatula 62.35 0.00e+00 669.00
IUUC-Mac-065204 Musa acuminata 60.46 3.00e-170 590.00
IUUC-Oba-075131 Oryza barthii 62.62 5.00e-148 518.00
IUUC-Obr-076763 Oryza brachyantha 63.68 1.00e-159 556.00
IUUC-Ogl-077264 Oryza glaberrima 62.36 1.00e-159 556.00
IUUC-Ogu-078646 Oryza glumaepatula 62.36 1.00e-159 556.00
IUUC-Oin-079613 Oryza indica 58.89 4.00e-149 521.00
IUUC-Olo-080250 Oryza longistaminata 64.19 6.00e-160 557.00
IUUC-Ome-081416 Oryza meridionalis 62.36 8.00e-160 557.00
IUUC-Oni-082102 Oryza nivara 62.14 1.00e-158 553.00
IUUC-Opu-083135 Oryza punctata 63.72 1.00e-158 553.00
IUUC-Oru-084644 Oryza rufipogon 62.36 2.00e-159 556.00
IUUC-Osa-086195 Oryza sativa 64.06 3.00e-150 525.00
IUUC-Ppa-095936 Physcomitrella patens 54.00 2.00e-133 469.00
IUUC-Pop-099232 Populus trichocarpa 65.23 0.00e+00 697.00
IUUC-Ppe-101845 Prunus persica 63.99 3.00e-178 617.00
IUUC-Sja-107805 Schizosaccharomyces japonicus 37.09 3.00e-54 205.00
IUUC-Smo-109625 Selaginella moellendorffii 55.00 8.00e-148 517.00
IUUC-Sit-109798 Setaria italica 63.41 4.00e-163 568.00
IUUC-Sly-111333 Solanum lycopersicum 57.94 0.00e+00 674.00
IUUC-Stu-112696 Solanum tuberosum 61.94 1.00e-122 431.00
IUUC-Sbi-113982 Sorghum bicolor 63.62 1.00e-160 559.00
IUUC-Tca-121521 Theobroma cacao 54.41 0.00e+00 699.00
IUUC-Tae-125546 Triticum aestivum 60.35 6.00e-157 548.00
IUUC-Tur-126423 Triticum urartu 65.56 4.00e-141 494.00
IUUC-Vvi-130927 Vitis vinifera 68.51 0.00e+00 648.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved