iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-110864

Ensembl Protein ID

Solyc07g040790.2.1

UniProt Accession

K4CDV6; K4CDV6_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc07g040790.2	Solyc07g040790.2.1	Solyc07g040790.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-17	63.9	196	234

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+d  +c+    ++ + +++Gs Dgt ++WD rtg++++
   Q: 196  GHSDYLHCI-VarNShNQVITGSEDGTARIWDCRTGKCIQ 234
           8*******9.448666**********************87 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MATAMDCRNW EEDIYRDSII LERESQCRTV FRTAFAPNPD HNSYPDLIVA AISDGSIAAY 60
SISSCLGLNS AGNSLVPVAE PSWLVQGHDG PAYDVKFYGN HEDSLLLSCG DDGRIRGWKW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATTTCTAAA CACTTTTTGT CAAAATCCCC TCAATTATCT CGATTCACTA CACACAAAAC 60
ATTACGGTAA CAATGGCGAC AGCCATGGAC TGCAGAAACT GGGAAGAAGA CATATACAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0000347--C:THO complex
GO:0009788--P:negative regulation of abscisic acid-activated signaling pathway
GO:0010267--P:production of ta-siRNAs involved in RNA interference
GO:0016567--P:protein ubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001101	Aegilops tauschii	49.17	5.00e-81	293.00
IUUC-Aml-001693	Ailuropoda melanoleuca	28.46	1.00e-26	112.00
IUUC-Atr-002699	Amborella trichopoda	58.06	1.00e-87	315.00
IUUC-Aca-004231	Anolis carolinensis	29.91	2.00e-25	109.00
IUUC-Aly-006385	Arabidopsis lyrata	59.27	2.00e-99	355.00
IUUC-Ath-006723	Arabidopsis thaliana	57.95	3.00e-97	347.00
IUUC-Ame-010813	Astyanax mexicanus	26.85	3.00e-22	97.80
IUUC-Bta-013458	Bos taurus	28.08	5.00e-26	110.00
IUUC-Bdi-014935	Brachypodium distachyon	52.12	1.00e-82	299.00
IUUC-Bol-015442	Brassica oleracea	58.00	5.00e-101	360.00
IUUC-Bra-017807	Brassica rapa	58.00	8.00e-101	359.00
IUUC-Cja-019061	Callithrix jacchus	28.85	6.00e-28	117.00
IUUC-Cfa-021146	Canis familiaris	28.46	9.00e-27	113.00
IUUC-Cpo-022512	Cavia porcellus	28.46	4.00e-26	111.00
IUUC-Csa-023055	Chlorocebus sabaeus	29.23	8.00e-28	116.00
IUUC-Cho-024693	Choloepus hoffmanni	29.85	1.00e-21	95.10
IUUC-Cin-025181	Ciona intestinalis	31.20	6.00e-27	114.00
IUUC-Csv-025852	Ciona savignyi	29.84	8.00e-23	100.00
IUUC-Dre-028221	Danio rerio	27.61	7.00e-29	120.00
IUUC-Dno-029200	Dasypus novemcinctus	32.00	5.00e-18	83.20
IUUC-Dor-030863	Dipodomys ordii	28.46	8.00e-26	110.00
IUUC-Dme-032016	Drosophila melanogaster	28.36	4.00e-17	81.30
IUUC-Eca-034363	Equus caballus	28.46	9.00e-27	113.00
IUUC-Fca-036546	Felis catus	28.08	5.00e-26	110.00
IUUC-Gmo-038513	Gadus morhua	28.89	4.00e-28	117.00
IUUC-Gac-042606	Gasterosteus aculeatus	30.80	2.00e-29	122.00
IUUC-Gma-043171	Glycine max	61.31	2.00e-103	367.00
IUUC-Ggo-044877	Gorilla gorilla	29.23	9.00e-28	116.00
IUUC-Hsa-045813	Homo sapiens	29.23	1.00e-27	116.00
IUUC-Hvu-047782	Hordeum vulgare	53.91	2.00e-33	134.00
IUUC-Itr-047876	Ictidomys tridecemlineatus	28.08	4.00e-26	111.00
IUUC-Lch-049506	Latimeria chalumnae	26.74	1.00e-26	112.00
IUUC-Lpe-051203	Leersia perrieri	50.16	4.00e-71	261.00
IUUC-Loc-052451	Lepisosteus oculatus	33.57	2.00e-23	102.00
IUUC-Laf-053864	Loxodonta africana	28.63	1.00e-25	109.00
IUUC-Mcc-055705	Macaca mulatta	28.85	7.00e-25	107.00
IUUC-Meu-055926	Macropus eugenii	29.23	2.00e-25	108.00
IUUC-Mtr-058556	Medicago truncatula	60.45	5.00e-106	376.00
IUUC-Mmr-060836	Microcebus murinus	28.46	7.00e-26	110.00
IUUC-Mdo-062534	Monodelphis domestica	30.33	2.00e-23	102.00
IUUC-Mmu-063560	Mus musculus	28.08	3.00e-26	111.00
IUUC-Mac-065134	Musa acuminata	56.23	2.00e-90	325.00
IUUC-Mpu-066031	Mustela putorius furo	28.46	1.00e-26	113.00
IUUC-Mlu-068051	Myotis lucifugus	28.83	1.00e-24	106.00
IUUC-Nle-069080	Nomascus leucogenys	29.23	1.00e-27	116.00
IUUC-Opr-070787	Ochotona princeps	29.82	1.00e-25	109.00
IUUC-Ont-071952	Oreochromis niloticus	28.57	1.00e-28	119.00
IUUC-Oan-073334	Ornithorhynchus anatinus	31.31	3.00e-22	98.20
IUUC-Oba-075175	Oryza barthii	49.19	2.00e-73	268.00
IUUC-Obr-076393	Oryza brachyantha	51.15	2.00e-74	272.00
IUUC-Ogl-077603	Oryza glaberrima	50.00	2.00e-63	234.00
IUUC-Ogu-078211	Oryza glumaepatula	49.34	1.00e-71	263.00
IUUC-Oin-079554	Oryza indica	56.52	5.00e-68	250.00
IUUC-Olo-080922	Oryza longistaminata	52.02	3.00e-65	241.00
IUUC-Ome-081127	Oryza meridionalis	41.14	1.00e-51	196.00
IUUC-Oni-082376	Oryza nivara	49.34	1.00e-71	263.00
IUUC-Opu-083163	Oryza punctata	48.86	9.00e-72	263.00
IUUC-Oru-084311	Oryza rufipogon	49.34	1.00e-71	262.00
IUUC-Osa-085762	Oryza sativa	50.19	1.00e-61	228.00
IUUC-Oga-088804	Otolemur garnettii	28.85	9.00e-26	110.00
IUUC-Oar-090095	Ovis aries	27.31	3.00e-25	108.00
IUUC-Ptr-090731	Pan troglodytes	29.23	1.00e-27	116.00
IUUC-Pan-092595	Papio anubis	28.85	6.00e-28	117.00
IUUC-Psi-093866	Pelodiscus sinensis	27.57	7.00e-25	107.00
IUUC-Pma-094236	Petromyzon marinus	31.20	2.00e-31	128.00
IUUC-Pfo-096095	Poecilia formosa	28.03	4.00e-27	114.00
IUUC-Pab-098385	Pongo abelii	28.85	1.00e-27	115.00
IUUC-Pop-099433	Populus trichocarpa	64.55	3.00e-109	387.00
IUUC-Pca-101119	Procavia capensis	29.08	8.00e-19	87.00
IUUC-Ppe-101677	Prunus persica	63.25	2.00e-110	391.00
IUUC-Pva-102726	Pteropus vampyrus	28.08	1.00e-25	109.00
IUUC-Rno-105576	Rattus norvegicus	28.08	5.00e-26	110.00
IUUC-Sha-106774	Sarcophilus harrisii	28.46	4.00e-24	104.00
IUUC-Sit-109988	Setaria italica	51.16	6.00e-83	300.00
IUUC-Sar-113060	Sorex araneus	27.65	2.00e-21	95.50
IUUC-Sbi-114699	Sorghum bicolor	52.81	9.00e-84	302.00
IUUC-Ssc-116445	Sus scrofa	28.08	2.00e-26	112.00
IUUC-Tru-117834	Takifugu rubripes	28.63	3.00e-26	111.00
IUUC-Tni-119651	Tetraodon nigroviridis	28.80	1.00e-26	112.00
IUUC-Tca-121318	Theobroma cacao	68.54	5.00e-109	386.00
IUUC-Tae-124184	Triticum aestivum	49.17	4.00e-81	294.00
IUUC-Tur-126226	Triticum urartu	60.00	1.00e-58	219.00
IUUC-Tbe-128079	Tupaia belangeri	25.84	4.00e-12	64.30
IUUC-Ttr-128391	Tursiops truncatus	26.94	6.00e-19	87.40
IUUC-Vvi-131148	Vitis vinifera	67.87	9.00e-114	402.00
IUUC-Xtr-132743	Xenopus tropicalis	27.39	5.00e-22	97.80
IUUC-Xma-133722	Xiphophorus maculatus	28.10	5.00e-29	120.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence