iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114341

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G274400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g032630	Sb03g032630.1	Sb03g032630.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-28	97.9	284	314

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWD 29
           H+++v+c+++   d +++++Gs D+++++WD
   Q: 284  HSGDVHCVDWnpLDvNYILTGSADNSVRMWD 314
           ************888**************** PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MKERSGSRAA VDERYAQWKS LIPVLYDWFA NHNLVWPSLS CRWGPQFEKA TYKNRQRLYL 60
SEQTDGSVPN TLVIANCEVV KPRVAAAEHI SQFNEEARSP FVKKYKTIVH PGEVNRIREL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACGCAAGGAC TCCCCACAAG CGCCCAGCAC GCTCTCGCAG TAGCAGCGAG CGAGCGTGCC 60
GAGGGAGTGA GAGGTGCGGA GCAGTCGCCG GCGTCGACCT TCGTTGTCGG AGATGAAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

sbi:SORBI_03g032630

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000914	Aegilops tauschii	85.52	0.00e+00	711.00
IUUC-Atr-003045	Amborella trichopoda	78.25	0.00e+00	704.00
IUUC-Aly-006131	Arabidopsis lyrata	77.02	0.00e+00	749.00
IUUC-Ath-007494	Arabidopsis thaliana	77.02	0.00e+00	750.00
IUUC-Bdi-014938	Brachypodium distachyon	89.47	0.00e+00	820.00
IUUC-Bol-015567	Brassica oleracea	78.20	0.00e+00	748.00
IUUC-Bra-017112	Brassica rapa	76.82	0.00e+00	750.00
IUUC-Gma-042982	Glycine max	79.03	0.00e+00	749.00
IUUC-Hvu-047149	Hordeum vulgare	90.14	6.00e-65	238.00
IUUC-Lpe-051595	Leersia perrieri	81.60	0.00e+00	702.00
IUUC-Mtr-057993	Medicago truncatula	78.44	0.00e+00	751.00
IUUC-Mac-065523	Musa acuminata	79.35	4.00e-176	609.00
IUUC-Oba-075959	Oryza barthii	82.29	0.00e+00	712.00
IUUC-Obr-076021	Oryza brachyantha	88.98	0.00e+00	801.00
IUUC-Ogl-077211	Oryza glaberrima	88.55	0.00e+00	791.00
IUUC-Ogu-078314	Oryza glumaepatula	77.97	0.00e+00	656.00
IUUC-Oin-079269	Oryza indica	90.31	0.00e+00	800.00
IUUC-Olo-080631	Oryza longistaminata	76.29	0.00e+00	692.00
IUUC-Oni-082416	Oryza nivara	84.23	0.00e+00	736.00
IUUC-Opu-083571	Oryza punctata	77.45	0.00e+00	659.00
IUUC-Oru-084902	Oryza rufipogon	83.15	0.00e+00	719.00
IUUC-Osa-085579	Oryza sativa	90.31	0.00e+00	800.00
IUUC-Olu-087795	Ostreococcus lucimarinus	40.58	8.00e-84	303.00
IUUC-Ppa-095350	Physcomitrella patens	63.53	3.00e-172	597.00
IUUC-Pop-099098	Populus trichocarpa	76.22	0.00e+00	719.00
IUUC-Ppe-101724	Prunus persica	77.46	0.00e+00	724.00
IUUC-Sit-110597	Setaria italica	96.91	0.00e+00	839.00
IUUC-Sly-111411	Solanum lycopersicum	77.36	0.00e+00	714.00
IUUC-Stu-112285	Solanum tuberosum	80.97	5.00e-165	572.00
IUUC-Tca-121523	Theobroma cacao	77.87	0.00e+00	731.00
IUUC-Tae-125281	Triticum aestivum	87.66	0.00e+00	799.00
IUUC-Tur-126763	Triticum urartu	73.96	0.00e+00	706.00
IUUC-Vvi-131642	Vitis vinifera	79.74	0.00e+00	724.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence