iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000289

Ensembl Protein ID

EMT16354

UniProt Accession

N1QYV8; N1QYV8_AEGTA

Genbank Protein ID

EMT16354.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

KD537922

Gene Name

F775_14012

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_14012	EMT16354	EMT16354

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.20e-26	92.5	18	90
E3 adaptor/Cullin RING/DCX/DWD	7.20e-12	45.8	766	799

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawceens 73
           +p++f+CpI+ +++ dPv+l++G+ty+r++I++wl++g+ tcP+trq+l+  +l + n++l+rli  w+e++ 
   Q: 18   TPKDFVCPITSQVFDDPVTLETGQTYERRAIQEWLDRGNATCPITRQHLHGGSLpKTNYVLKRLIAGWREQSP 90
           69*******************************************************************9975 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           Ht  +t+l+  ++   l sGs D ti+vW +r+g
   Q: 766  HTKAITSLSIlPSeEKLYSGSMDRTIRVWQFRDG 799
           999******99666****************9987 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MGGDAELSRH QQQQAATTPK DFVCPITSQV FDDPVTLETG QTYERRAIQE WLDRGNATCP 60
ITRQHLHGGS LPKTNYVLKR LIAGWREQSP PATPITPPTP ATPAVPRTPA TAKMESPAPA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCGGCG ACGCCGAGCT GTCGCGGCAT CAGCAGCAGC AGGCGGCGAC GACGCCCAAG 60
GACTTCGTGT GCCCGATCAC CAGCCAGGTC TTCGACGACC CCGTCACGCT CGAGACCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0808--Transferase
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04564--U-box
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

ats:F775_14012

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002936	Amborella trichopoda	48.26	0.00e+00	799.00
IUUC-Bdi-014680	Brachypodium distachyon	83.40	0.00e+00	1540.00
IUUC-Gma-044085	Glycine max	48.94	0.00e+00	934.00
IUUC-Hvu-047711	Hordeum vulgare	96.84	0.00e+00	754.00
IUUC-Lpe-051224	Leersia perrieri	72.41	0.00e+00	1225.00
IUUC-Mtr-058452	Medicago truncatula	49.60	0.00e+00	919.00
IUUC-Mac-064685	Musa acuminata	57.89	0.00e+00	1082.00
IUUC-Obr-076347	Oryza brachyantha	74.42	0.00e+00	1360.00
IUUC-Ogl-077695	Oryza glaberrima	77.84	0.00e+00	1275.00
IUUC-Ogu-078873	Oryza glumaepatula	77.12	0.00e+00	1296.00
IUUC-Oin-079745	Oryza indica	79.69	0.00e+00	748.00
IUUC-Olo-081050	Oryza longistaminata	72.36	0.00e+00	697.00
IUUC-Ome-081604	Oryza meridionalis	75.57	0.00e+00	1279.00
IUUC-Oni-082155	Oryza nivara	76.31	0.00e+00	1244.00
IUUC-Opu-083775	Oryza punctata	69.36	0.00e+00	1137.00
IUUC-Oru-084628	Oryza rufipogon	73.73	0.00e+00	1240.00
IUUC-Osa-086224	Oryza sativa	73.23	4.00e-141	494.00
IUUC-Pop-099122	Populus trichocarpa	51.15	0.00e+00	777.00
IUUC-Ppe-101249	Prunus persica	52.77	0.00e+00	911.00
IUUC-Smo-109666	Selaginella moellendorffii	34.57	7.00e-131	461.00
IUUC-Sit-110152	Setaria italica	76.51	0.00e+00	1417.00
IUUC-Sly-111919	Solanum lycopersicum	49.39	0.00e+00	915.00
IUUC-Stu-111946	Solanum tuberosum	50.35	0.00e+00	954.00
IUUC-Sbi-114464	Sorghum bicolor	75.30	0.00e+00	1391.00
IUUC-Tca-121369	Theobroma cacao	53.43	0.00e+00	1013.00
IUUC-Tae-123295	Triticum aestivum	96.91	0.00e+00	1792.00
IUUC-Tur-126163	Triticum urartu	88.11	0.00e+00	1417.00
IUUC-Vvi-131144	Vitis vinifera	54.96	0.00e+00	1033.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence