iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044256

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000841

Gene Name

GLYMA_08G037000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA08G04126	GLYMA08G04126.1	GLYMA08G04126.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-11	44.2	1093	1122
E3 activity/RING/U-box	8.70e-27	94.6	391	463

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWD 29
           Ht  vt l    sd++l sGs D t +vW+
   Q: 1093 HTKAVTNLVIseSDDRLYSGSLDRTARVWS 1122
           777777777788889**************8 PP

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawceens 73
           +p++f+CpI+  ++ dPv+l++G+ty+r++Ie+w+++g+ tcP+trq+l++++l + n++l+rli +w ++n 
   Q: 391  PPKDFVCPITSHIFDDPVTLETGQTYERKAIEEWFNRGNITCPITRQKLQNTQLpKTNYVLKRLIASWKDRNP 463
           699*****************************************************************99985 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MTTVTVTTRA QILRHTAAFT SSVLSQSELR RRLIATLLRD TPFSDQKHLN LAADTLESAI 60
SFSSPALRFS SLSLAEKLLL PLPDFPLSSL LLSLIHALRN RPTESAVSLL RIFHSNASLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTGATTAAA AACTCTCGCA GCAATGTTTT GCAGTAACAT TAAATACAAG GGTCACATTG 60
GTAAAGTAAA GTATTTTATT TTAGTATTTT ATGAAAGTAA AACATGGTAA GACCAAAACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04564--U-box
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

gmx:100808867

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Hvu-047711	Hordeum vulgare	47.74	1.00e-99	356.00
IUUC-Lpe-051224	Leersia perrieri	48.80	0.00e+00	797.00
IUUC-Mtr-058452	Medicago truncatula	76.41	0.00e+00	1876.00
IUUC-Mac-064685	Musa acuminata	49.68	0.00e+00	1149.00
IUUC-Ppe-101249	Prunus persica	59.40	0.00e+00	1329.00
IUUC-Stu-111946	Solanum tuberosum	52.26	0.00e+00	1293.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence