iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058786

Ensembl Protein ID

AES88970

UniProt Accession

G7JDN4; G7JDN4_MEDTR

Genbank Protein ID

AES88970.1

Protein Name

RING finger protein

Genbank Nucleotide ID

CM001220

Gene Name

MTR_4g065580

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g065580	AES88970	AES88970

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.30e-06	29.0	152	227

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkd..................................gplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C +C  d+++                                  ++ +lpC H+fh++Cl ++   +  + +   CP+C
   Q: 152  CVLCGKDLEEeeeeedsiqdgedelqhylfssqgredlsstvlsEVAILPCSHIFHETCLSAL---PLTTITDPPCPIC 227
           889966663333333444444444444444444444444444444889************888...777999999**** PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MASTPAIQKN KETKQQNEGT ITSRLKSNLT RVAGKPRVSK PPKEKGINKS LVVKFQTEKV 60
TKKRSGSTRP KTKDLSSCTN VPSSKNLEQP RKIQKIQSSL GGPSSDKVGK GKEKENPTLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCATCTA CTCCAGCAAT TCAGAAAAAT AAAGAGACTA AACAACAGAA TGAAGGAACA 60
ATTACATCTA GATTGAAATC CAATCTTACT AGAGTTGCAG GTAATCCGCA TATTTTATAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_4g065580

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000295	Aegilops tauschii	42.11	5.00e-05	42.00
IUUC-Aml-001847	Ailuropoda melanoleuca	42.86	2.00e-05	42.00
IUUC-Atr-003088	Amborella trichopoda	45.45	3.00e-04	39.30
IUUC-Hvu-047559	Hordeum vulgare	42.11	5.00e-05	42.00
IUUC-Lpe-051547	Leersia perrieri	34.88	3.00e-04	40.00
IUUC-Mac-065449	Musa acuminata	39.53	5.00e-04	38.90
IUUC-Oba-075177	Oryza barthii	46.88	1.00e-05	43.50
IUUC-Olo-080840	Oryza longistaminata	46.88	1.00e-05	43.50
IUUC-Opu-083349	Oryza punctata	39.53	1.00e-04	42.00
IUUC-Osa-086090	Oryza sativa	46.88	2.00e-05	43.10
IUUC-Pop-099769	Populus trichocarpa	45.00	1.00e-05	42.70
IUUC-Smo-109244	Selaginella moellendorffii	46.88	6.00e-04	35.00
IUUC-Sly-111394	Solanum lycopersicum	39.53	2.00e-05	43.10
IUUC-Stu-112062	Solanum tuberosum	45.95	2.00e-04	38.50
IUUC-Tca-121509	Theobroma cacao	45.00	3.00e-05	41.20
IUUC-Tur-126686	Triticum urartu	42.11	6.00e-05	41.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence