iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017481

Ensembl Protein ID

Bra040085.1-P

UniProt Accession

M4FG58; M4FG58_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra040085	Bra040085.1	Bra040085.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.50e-25	87.7	669	698
UBD/Beta-Prp	3.40e-49	168.6	617	756

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           Ht+ +t+++f ++ ++l+++s D+t++vWD
   Q: 669  HTAMITDVRFsPSlPRLATSSFDKTVRVWD 698
           88889******999**************** PP

UBD/Beta-Prp

   S: 44   l...lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsgh 136
           +   l s+   +++vt++ fs+dgk+l++++ D+ + +w  +t k+  tl++h++++++++fsps  +l++ s d+t+rvwd +++  +  t+ gh
   Q: 617  TfteLNSVRASTSKVTCCHFSSDGKMLASAGHDKKAVLWHTDTMKPKTTLEEHTAMITDVRFSPSLPRLATSSFDKTVRVWDADNKGYSLRTFMGH 712
           33335666677788********************************************************************987655545***** PP
   S: 137  dgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltggh 179
           +++v+++ +hp++ +l+ s+ +D+ +r W++++g++ r  +gg 
   Q: 713  SSMVTSLDFHPNKdDLICSCDTDGEIRYWSINNGSCTRVYKGGS 756
           *************************************9998865 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSQTNWEADK MLDVYIYDYL VKRDLKATAQ AFQAEGKVSS DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNEK HSEVAASYIE TQMIKAREQQ LQQSHHPQIS QQQQQQQQQQ IQMQQLLLQR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTCAGA CCAACTGGGA AGCTGATAAA ATGTGAGTCT TTTGATTTCC CCTCACTGAT 60
ACACTCTGCT TCTTGCCAAT TTTGAGTTGG GTTTTTGATT TTGTGCGTTC TTGAATTTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006446	Arabidopsis lyrata	87.87	0.00e+00	1194.00
IUUC-Ath-006594	Arabidopsis thaliana	83.12	0.00e+00	1169.00
IUUC-Bdi-014395	Brachypodium distachyon	60.27	0.00e+00	726.00
IUUC-Bol-016368	Brassica oleracea	97.15	0.00e+00	1267.00
IUUC-Gma-043258	Glycine max	73.47	0.00e+00	908.00
IUUC-Hvu-047499	Hordeum vulgare	64.91	1.00e-152	532.00
IUUC-Lpe-051536	Leersia perrieri	57.16	0.00e+00	714.00
IUUC-Mtr-058613	Medicago truncatula	70.98	0.00e+00	915.00
IUUC-Oba-075419	Oryza barthii	56.26	0.00e+00	667.00
IUUC-Obr-076118	Oryza brachyantha	57.49	0.00e+00	726.00
IUUC-Ogl-077064	Oryza glaberrima	59.08	0.00e+00	735.00
IUUC-Ogu-078816	Oryza glumaepatula	55.85	0.00e+00	652.00
IUUC-Oin-079642	Oryza indica	56.44	0.00e+00	685.00
IUUC-Ome-081901	Oryza meridionalis	55.78	0.00e+00	660.00
IUUC-Oni-082753	Oryza nivara	56.39	0.00e+00	671.00
IUUC-Opu-083283	Oryza punctata	55.18	0.00e+00	644.00
IUUC-Oru-084538	Oryza rufipogon	56.39	0.00e+00	665.00
IUUC-Osa-086142	Oryza sativa	59.35	0.00e+00	738.00
IUUC-Ppa-095985	Physcomitrella patens	66.90	9.00e-161	559.00
IUUC-Pop-098994	Populus trichocarpa	75.17	0.00e+00	990.00
IUUC-Smo-108724	Selaginella moellendorffii	53.62	0.00e+00	692.00
IUUC-Sit-109866	Setaria italica	58.60	0.00e+00	721.00
IUUC-Sly-110921	Solanum lycopersicum	70.77	0.00e+00	860.00
IUUC-Sbi-113848	Sorghum bicolor	59.28	0.00e+00	712.00
IUUC-Tca-121720	Theobroma cacao	73.12	0.00e+00	912.00
IUUC-Tae-124192	Triticum aestivum	59.31	0.00e+00	711.00
IUUC-Tur-126743	Triticum urartu	53.53	7.00e-179	620.00
IUUC-Vvi-131473	Vitis vinifera	71.35	0.00e+00	943.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence