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Tag Content
UUCD2 ID IUUC-Pop-098994
UUCD1 version UUC-PoT-00720
Ensembl Protein ID POPTR_0006s26420.1
UniProt Accession B9H9Q7; B9H9Q7_POPTR
Genbank Protein ID EEE93116.2
Protein Name LEUNIG family protein
Genbank Nucleotide ID CM000342
Gene Name POPTRDRAFT_819573; POPTR_0006s26420g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0006s26420 POPTR_0006s26420.1 POPTR_0006s26420.1
POPTR_0006s26420 POPTR_0006s26420.3 POPTR_0006s26420.3
POPTR_0006s26420 POPTR_0006s26420.2 POPTR_0006s26420.2
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 4.90e-25 87.6 661 690
UBD/Beta-Prp 1.20e-46 160.4 613 747
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           Ht+ +t+++f ++  +l+++s D+t++vWD
   Q: 661  HTSLITDVRFsPSmSRLATSSFDKTVRVWD 690
           9**********66799************** PP
   

   UBD/Beta-Prp
   S: 87   vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.ktgkllrtlt 176
           v ++++  ++v++++fs +g+ l+sG+hd+ + +w ++t +    tl++h+++++ v+++p+ + l+++s D+tvr+Wd  + ++ lrt+t
   Q: 613  VNSVRASASKVVCCHFSSDGKLLASGGHDKKAVLWYTDTLKPKT-TLEEHTSLITDVRFSPSMSRLATSSFDKTVRVWDAdNPNFSLRTFT 702
           55566667777777777777777777777777777777777776.7777777777777777777777777777777777744566777777 PP
   S: 177  gghtdsvyslsfdsng.kelvsgsldgtvklwdlqtgecvrtlngh 221
           g h   v sl+f++n+   + s++ +g +++w++ +g+c r ++g 
   Q: 703  G-HSATVMSLDFHPNKdDLISSCDGNGEIRYWSVTNGSCARVFKGG 747
           7.77777777777777333446777777777777777777777664 PP
   
Organism Populus trichocarpa
Protein Sequence
(Fasta)
MSQTNWEADK MLDVYIHDYL VKRDLKASAQ AFQAEGKVSS DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNEK HSEVAASYIE TQLLKAREQQ QQGQQPQHQQ QQQQQMQMQQ LLLQRQQQQQ 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Pop-098994|E3,WD_repeat;UBD,Beta-Prp|Populus trichocarpa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CTCGCAATCC ACCAAAAGCT ACAGAGATAA TTTTTTTATT CTCAACAAAA TATAGTAGTT 60
TTCTTTTTTG GGTTTTCAGG TATCGCGATA TTTAATTTTC CTTTGATTTC CCATAAATAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Pop-098994|E3,WD_repeat;UBD,Beta-Prp|Populus trichocarpa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR006594--LisH
IPR000536--Nucl_hrmn_rcpt_lig-bd
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF08513--LisH
PF00400--WD40
SMART

SM00667--LisH
SM00320--WD40
KEGG pop:POPTR_0006s26420g
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000855 Aegilops tauschii 61.84 0.00e+00 738.00
IUUC-Atr-002973 Amborella trichopoda 72.14 0.00e+00 844.00
IUUC-Aly-006446 Arabidopsis lyrata 73.25 0.00e+00 1013.00
IUUC-Ath-006594 Arabidopsis thaliana 69.39 0.00e+00 993.00
IUUC-Bdi-014395 Brachypodium distachyon 62.91 0.00e+00 752.00
IUUC-Bol-015720 Brassica oleracea 71.83 0.00e+00 947.00
IUUC-Bra-017481 Brassica rapa 72.34 0.00e+00 999.00
IUUC-Gma-043258 Glycine max 78.25 0.00e+00 1006.00
IUUC-Hvu-047499 Hordeum vulgare 65.17 7.00e-150 523.00
IUUC-Lpe-051536 Leersia perrieri 62.99 0.00e+00 780.00
IUUC-Mtr-058613 Medicago truncatula 75.07 0.00e+00 994.00
IUUC-Mac-064770 Musa acuminata 65.98 0.00e+00 862.00
IUUC-Oba-075419 Oryza barthii 57.90 0.00e+00 685.00
IUUC-Obr-076118 Oryza brachyantha 58.73 0.00e+00 725.00
IUUC-Ogl-077031 Oryza glaberrima 64.88 0.00e+00 899.00
IUUC-Ogu-078816 Oryza glumaepatula 57.50 0.00e+00 670.00
IUUC-Oin-079642 Oryza indica 62.12 0.00e+00 755.00
IUUC-Olo-080338 Oryza longistaminata 60.79 0.00e+00 652.00
IUUC-Ome-081901 Oryza meridionalis 61.47 0.00e+00 729.00
IUUC-Oni-082753 Oryza nivara 57.90 0.00e+00 687.00
IUUC-Opu-083283 Oryza punctata 56.44 0.00e+00 657.00
IUUC-Oru-084538 Oryza rufipogon 58.03 0.00e+00 684.00
IUUC-Osa-086142 Oryza sativa 60.96 0.00e+00 759.00
IUUC-Ppa-095985 Physcomitrella patens 68.14 2.00e-163 567.00
IUUC-Ppe-102018 Prunus persica 78.91 0.00e+00 1035.00
IUUC-Smo-109607 Selaginella moellendorffii 58.52 0.00e+00 744.00
IUUC-Sit-109866 Setaria italica 62.88 0.00e+00 780.00
IUUC-Sly-110921 Solanum lycopersicum 77.00 0.00e+00 952.00
IUUC-Sbi-113848 Sorghum bicolor 62.34 0.00e+00 781.00
IUUC-Tca-121720 Theobroma cacao 80.82 0.00e+00 1035.00
IUUC-Tae-125656 Triticum aestivum 61.91 0.00e+00 754.00
IUUC-Tur-126743 Triticum urartu 56.44 0.00e+00 667.00
IUUC-Vvi-131473 Vitis vinifera 80.85 0.00e+00 1065.00
Created Date 25-Jun-2017

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