iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058539

Ensembl Protein ID

AES92425

UniProt Accession

G7JEB1; G7JEB1_MEDTR

Genbank Protein ID

AES92425.1; KEH32573.1

Protein Name

Zinc finger, C3HC4 type (RING finger) protein

Genbank Nucleotide ID

CM001220; CM001220

Gene Name

MTR_4g129335; MTR_4g129370

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g129370	AES92425	AES92425

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-06	30.4	102	144

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg.plvlp..CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+ f++g ++ +   CgHvfh+ C+  w        k ++CP+Cr
   Q: 102  CAVCLDGFRNGqWCRNLaaCGHVFHRRCIDTW------LLKVATCPTCR 144
           ********77654422246*************......999*******8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MPPHHHHGDP EQPKPNPNLL SLFLKPIIML LLTSLFFLFL GFAAFLLLNL FLLAGALHRL 60
RFRPTPTRRL QSLTDAFLPR EINNLPNFRI TKGSVSEPDS RCAVCLDGFR NGQWCRNLAA 120

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Nucleotide Sequence
(Fasta)

GTACCCGCCG CTAGATTTGT AACTACATCT ACGCGTATCC CGACCCTTCC TTCATTTCTT 60
CTATATTCCT TCCTATTTGT TTAATTCCTA TTCCAAGCTT CTGTTATTAT TGCCACCATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_4g129335; mtr:MTR_4g129370

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006401	Arabidopsis lyrata	48.84	2.00e-22	97.80
IUUC-Ath-007060	Arabidopsis thaliana	49.44	8.00e-23	99.00
IUUC-Bol-015094	Brassica oleracea	56.00	5.00e-22	96.30
IUUC-Bra-017657	Brassica rapa	53.09	3.00e-22	97.10
IUUC-Pop-099663	Populus trichocarpa	56.14	4.00e-17	80.10
IUUC-Ppe-101566	Prunus persica	53.75	7.00e-23	99.40
IUUC-Sly-111550	Solanum lycopersicum	47.83	2.00e-15	74.30
IUUC-Stu-112197	Solanum tuberosum	48.05	2.00e-16	77.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence