iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121429

Ensembl Protein ID

EOY32059

UniProt Accession

A0A061GY62; A0A061GY62_THECC

Genbank Protein ID

EOY32059.1

Protein Name

Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

CM001887

Gene Name

TCM_039496

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_039496	EOY32059	EOY32059

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.70e-26	91.0	378	414
UBD/Beta-Prp	5.80e-44	151.4	322	541

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH+  v++++f +d t ++++++D++ik WD+ tg +
   Q: 378  GHSKAVRDISFcNDgTKFLTAGYDKNIKYWDTETGQV 414
           8***********999*****************99976 PP

UBD/Beta-Prp

   S: 38   dvttgkllrslsgheaevtavkfspdgk.ilvtgseDrtikvwdl.stgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsgh 136
            + ++ l+++ sgh+++v+a++f p++  ++++++ D  +k+wd+ ++gkc++t+ gh++ v+++sf+ +g k+++++ d+ i+ wd+etgq+++++ +g+
   Q: 322  CYIPKRLVHTWSGHTKGVSAIRFFPKYGhLILSAGMDTKVKIWDVfNSGKCMRTYMGHSKAVRDISFCNDGTKFLTAGYDKNIKYWDTETGQVISTFSTGK 422
           5667889******************98889*************86269***********************************************999999 PP
   S: 137  dgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlng.htdnvksvrfspnde 235
              v  ++ ++d+ n+l +G+ D+++  Wd++tg++ ++  + h ++v+ ++f +n +++v+ s+d+++++w++    +++   + h   + s+ ++pn++
   Q: 423  IPYVVKLNPDEDKqNILLAGMSDKKIVQWDINTGQITQEYDQ-HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEpHMHSMPSISLHPNTN 522
           99999999999999**************************98.********************************88777666556*************** PP
   S: 236  rlvsgssDgsiriWdlrsg 254
           +l+  s D++i i+ +r +
   Q: 523  WLAAQSLDNQILIYSTRAR 541
           **************77765 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MPEMGHNNLK VFSNYHVSSL SASLVEAVEN DVSLDTQAFR KSSMDLLQTY ADNSDSDDQN 60
RQPSTSSPDS SPPRLIPSKS AAPKVDDTML ALTAAKTHQA HSKPIDPTQH VVAFNPTYDQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTGAAGTTG TTGAAAATGG ATCATAATTC ATAAGTCATT CATATACGTG GGCCTTTCTT 60
GTTGTTTATT TGTTGCAAAT TTGGGCTTAG CAAAAGAAAA TGCCAGAAAT GGGCCACAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	73.81	0.00e+00	796.00
IUUC-Aml-002243	Ailuropoda melanoleuca	45.52	3.00e-95	341.00
IUUC-Atr-002502	Amborella trichopoda	78.89	0.00e+00	903.00
IUUC-Apl-003885	Anas platyrhynchos	50.09	1.00e-149	522.00
IUUC-Aca-004854	Anolis carolinensis	35.87	3.00e-87	315.00
IUUC-Aly-006158	Arabidopsis lyrata	80.51	0.00e+00	904.00
IUUC-Ath-007474	Arabidopsis thaliana	81.80	0.00e+00	890.00
IUUC-Ago-007726	Ashbya gossypii	38.83	9.00e-71	259.00
IUUC-Acl-008220	Aspergillus clavatus	50.72	1.00e-107	382.00
IUUC-Afl-008473	Aspergillus flavus	51.30	3.00e-108	385.00
IUUC-Afu-008773	Aspergillus fumigatus	51.30	1.00e-108	386.00
IUUC-Ani-009323	Aspergillus nidulans	52.88	8.00e-96	343.00
IUUC-Ang-009851	Aspergillus niger	51.43	6.00e-109	387.00
IUUC-Aor-009950	Aspergillus oryzae	51.30	3.00e-108	385.00
IUUC-Ate-010372	Aspergillus terreus	51.87	6.00e-109	387.00
IUUC-Ame-011660	Astyanax mexicanus	50.00	8.00e-150	523.00
IUUC-Bgr-012230	Blumeria graminis	49.71	1.00e-105	375.00
IUUC-Bta-012568	Bos taurus	50.09	5.00e-151	526.00
IUUC-Bci-013646	Botrytis cinerea	53.61	2.00e-109	388.00
IUUC-Bdi-014199	Brachypodium distachyon	73.04	0.00e+00	798.00
IUUC-Bol-015695	Brassica oleracea	78.80	0.00e+00	904.00
IUUC-Bra-017923	Brassica rapa	79.79	0.00e+00	909.00
IUUC-Cel-018535	Caenorhabditis elegans	47.97	3.00e-107	381.00
IUUC-Cja-019071	Callithrix jacchus	50.09	1.00e-150	525.00
IUUC-Cfa-020559	Canis familiaris	50.09	8.00e-151	526.00
IUUC-Cpo-022356	Cavia porcellus	49.91	2.00e-150	525.00
IUUC-Cre-022594	Chlamydomonas reinhardtii	49.85	4.00e-93	333.00
IUUC-Csa-023125	Chlorocebus sabaeus	50.09	6.00e-151	526.00
IUUC-Cho-024676	Choloepus hoffmanni	48.14	2.00e-137	481.00
IUUC-Cin-025229	Ciona intestinalis	49.91	2.00e-147	514.00
IUUC-Csv-025868	Ciona savignyi	67.39	1.00e-36	143.00
IUUC-Cgl-026739	Colletotrichum gloeosporioides	47.26	2.00e-94	338.00
IUUC-Cne-026885	Cryptococcus neoformans	60.29	1.00e-128	452.00
IUUC-Dre-027631	Danio rerio	49.44	2.00e-152	531.00
IUUC-Dno-029815	Dasypus novemcinctus	63.02	6.00e-133	467.00
IUUC-Dor-031143	Dipodomys ordii	61.61	7.00e-129	453.00
IUUC-Dse-031520	Dothistroma septosporum	47.06	7.00e-96	343.00
IUUC-Dme-032050	Drosophila melanogaster	44.33	2.00e-142	498.00
IUUC-Ete-032866	Echinops telfairi	48.60	7.00e-146	509.00
IUUC-Eca-033384	Equus caballus	49.91	4.00e-149	520.00
IUUC-Eeu-034471	Erinaceus europaeus	39.65	2.00e-100	358.00
IUUC-Fca-035727	Felis catus	50.09	4.00e-151	527.00
IUUC-Fal-036774	Ficedula albicollis	50.37	8.00e-152	529.00
IUUC-Fox-037951	Fusarium oxysporum	51.30	7.00e-107	380.00
IUUC-Fso-038287	Fusarium solani	52.77	1.00e-106	379.00
IUUC-Gmo-039670	Gadus morhua	49.29	1.00e-153	535.00
IUUC-Ggr-039764	Gaeumannomyces graminis	48.85	8.00e-102	363.00
IUUC-Gga-040293	Gallus gallus	50.19	3.00e-152	530.00
IUUC-Gac-042159	Gasterosteus aculeatus	46.03	8.00e-152	529.00
IUUC-Gma-044299	Glycine max	83.61	0.00e+00	878.00
IUUC-Ggo-044864	Gorilla gorilla	50.09	7.00e-151	526.00
IUUC-Hsa-046602	Homo sapiens	50.09	7.00e-151	526.00
IUUC-Itr-047985	Ictidomys tridecemlineatus	63.05	2.00e-134	471.00
IUUC-Kpa-049318	Komagataella pastoris	46.41	4.00e-90	324.00
IUUC-Lch-049796	Latimeria chalumnae	42.38	8.00e-119	419.00
IUUC-Lpe-051153	Leersia perrieri	73.65	0.00e+00	809.00
IUUC-Loc-052467	Lepisosteus oculatus	49.81	1.00e-150	525.00
IUUC-Lma-053107	Leptosphaeria maculans	50.00	6.00e-105	373.00
IUUC-Laf-053787	Loxodonta africana	50.93	4.00e-151	527.00
IUUC-Mcc-055706	Macaca mulatta	50.09	8.00e-151	526.00
IUUC-Meu-056757	Macropus eugenii	59.40	4.00e-116	411.00
IUUC-Mor-057079	Magnaporthe oryzae	48.99	2.00e-102	365.00
IUUC-Mpo-057533	Magnaporthe poae	49.43	6.00e-103	367.00
IUUC-Mtr-057950	Medicago truncatula	82.91	0.00e+00	946.00
IUUC-Mla-058910	Melampsora laricipopulina	59.02	7.00e-133	466.00
IUUC-Mga-059366	Meleagris gallopavo	50.19	6.00e-152	530.00
IUUC-Mvi-060349	Microbotryum violaceum	58.02	3.00e-123	435.00
IUUC-Mmr-061209	Microcebus murinus	51.30	9.00e-153	532.00
IUUC-Mdo-062118	Monodelphis domestica	49.65	1.00e-152	532.00
IUUC-Mmu-063173	Mus musculus	50.09	5.00e-151	526.00
IUUC-Mac-065109	Musa acuminata	93.18	0.00e+00	682.00
IUUC-Mpu-066659	Mustela putorius furo	50.09	5.00e-151	526.00
IUUC-Mlu-067029	Myotis lucifugus	50.19	4.00e-151	527.00
IUUC-Nfi-068334	Neosartorya fischeri	51.59	6.00e-109	387.00
IUUC-Ncr-068675	Neurospora crassa	47.21	5.00e-91	327.00
IUUC-Nle-070113	Nomascus leucogenys	50.09	5.00e-151	526.00
IUUC-Opr-070685	Ochotona princeps	61.93	4.00e-136	477.00
IUUC-Ont-071680	Oreochromis niloticus	49.91	2.00e-152	531.00
IUUC-Oan-073573	Ornithorhynchus anatinus	50.10	9.00e-139	486.00
IUUC-Ocu-074074	Oryctolagus cuniculus	51.30	2.00e-152	531.00
IUUC-Oba-075625	Oryza barthii	73.10	0.00e+00	811.00
IUUC-Obr-076510	Oryza brachyantha	69.90	0.00e+00	814.00
IUUC-Ogl-077275	Oryza glaberrima	73.10	0.00e+00	811.00
IUUC-Ogu-078563	Oryza glumaepatula	73.10	0.00e+00	811.00
IUUC-Oin-079898	Oryza indica	81.45	0.00e+00	686.00
IUUC-Olo-081080	Oryza longistaminata	71.74	0.00e+00	738.00
IUUC-Oni-083121	Oryza nivara	73.10	0.00e+00	811.00
IUUC-Opu-083329	Oryza punctata	74.01	0.00e+00	811.00
IUUC-Oru-084807	Oryza rufipogon	71.94	0.00e+00	713.00
IUUC-Osa-086039	Oryza sativa	73.15	0.00e+00	814.00
IUUC-Ola-087149	Oryzias latipes	51.21	9.00e-153	532.00
IUUC-Olu-087627	Ostreococcus lucimarinus	48.17	1.00e-141	495.00
IUUC-Oga-088359	Otolemur garnettii	48.67	3.00e-151	528.00
IUUC-Oar-089390	Ovis aries	50.09	1.00e-150	526.00
IUUC-Ptr-090894	Pan troglodytes	50.09	7.00e-151	526.00
IUUC-Pan-092476	Papio anubis	50.09	8.00e-151	526.00
IUUC-Psi-093527	Pelodiscus sinensis	49.40	2.00e-137	481.00
IUUC-Pno-094771	Phaeosphaeria nodorum	48.84	4.00e-103	367.00
IUUC-Ppa-095386	Physcomitrella patens	71.19	0.00e+00	843.00
IUUC-Pfo-096139	Poecilia formosa	50.00	3.00e-151	527.00
IUUC-Pab-097838	Pongo abelii	48.85	8.00e-128	449.00
IUUC-Pop-099962	Populus trichocarpa	86.88	0.00e+00	957.00
IUUC-Pca-100876	Procavia capensis	53.69	4.00e-111	394.00
IUUC-Ppe-101777	Prunus persica	86.54	0.00e+00	933.00
IUUC-Pva-102418	Pteropus vampyrus	50.09	7.00e-151	526.00
IUUC-Pgr-103456	Puccinia graminis	48.61	2.00e-143	501.00
IUUC-Ptt-103731	Puccinia triticina	46.95	9.00e-129	453.00
IUUC-Pte-104386	Pyrenophora teres	49.42	3.00e-102	364.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	49.42	4.00e-102	363.00
IUUC-Rno-105694	Rattus norvegicus	48.79	1.00e-142	499.00
IUUC-Sce-106339	Saccharomyces cerevisiae	36.39	1.00e-73	269.00
IUUC-Sha-106709	Sarcophilus harrisii	49.47	8.00e-152	529.00
IUUC-Sja-107817	Schizosaccharomyces japonicus	37.38	3.00e-105	375.00
IUUC-Spo-108331	Schizosaccharomyces pombe	47.97	1.00e-100	359.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	55.78	4.00e-98	351.00
IUUC-Smo-109326	Selaginella moellendorffii	61.19	0.00e+00	660.00
IUUC-Sit-110446	Setaria italica	74.05	0.00e+00	809.00
IUUC-Sly-111330	Solanum lycopersicum	83.81	0.00e+00	916.00
IUUC-Stu-112610	Solanum tuberosum	81.74	0.00e+00	917.00
IUUC-Sar-113065	Sorex araneus	37.50	1.00e-31	129.00
IUUC-Sbi-114005	Sorghum bicolor	74.00	0.00e+00	788.00
IUUC-Sre-114988	Sporisorium reilianum	56.65	2.00e-124	439.00
IUUC-Ssc-115760	Sus scrofa	50.09	5.00e-151	526.00
IUUC-Tgu-116493	Taeniopygia guttata	50.74	1.00e-153	536.00
IUUC-Tru-118489	Takifugu rubripes	48.71	1.00e-150	525.00
IUUC-Tsy-119332	Tarsius syrichta	51.30	8.00e-153	533.00
IUUC-Tni-120202	Tetraodon nigroviridis	47.30	9.00e-144	503.00
IUUC-Tre-122162	Trichoderma reesei	54.18	1.00e-110	392.00
IUUC-Tvi-122500	Trichoderma virens	53.89	2.00e-110	391.00
IUUC-Tae-125557	Triticum aestivum	73.29	0.00e+00	803.00
IUUC-Tur-126554	Triticum urartu	73.37	0.00e+00	799.00
IUUC-Tme-126919	Tuber melanosporum	42.42	5.00e-123	434.00
IUUC-Tbe-127968	Tupaia belangeri	48.14	7.00e-138	483.00
IUUC-Ttr-129215	Tursiops truncatus	49.91	4.00e-149	520.00
IUUC-Uma-129622	Ustilago maydis	46.03	2.00e-133	468.00
IUUC-Vda-129750	Verticillium dahliae	52.16	8.00e-108	383.00
IUUC-Vpa-130617	Vicugna pacos	49.72	1.00e-145	508.00
IUUC-Vvi-131238	Vitis vinifera	85.69	0.00e+00	948.00
IUUC-Xtr-131865	Xenopus tropicalis	50.19	5.00e-151	526.00
IUUC-Xma-133627	Xiphophorus maculatus	49.82	5.00e-151	526.00
IUUC-Yli-134390	Yarrowia lipolytica	51.59	6.00e-105	373.00
IUUC-Zma-135925	Zea mays	74.59	0.00e+00	787.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence