iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.6__2466__AT5G24710.1	fgenesh2_kg.6__2466__AT5G24710.1	fgenesh2_kg.6__2466__AT5G24710.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.60e-09	37.3	210	248

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcla.f...sd.tllvsGsdDgtikvWDlrtgv 34
           gH++s++cl  f   s+  llvsG+ Dg + +W+ + g+
   Q: 210  GHKGSIYCLMnFmasSGeALLVSGGSDGLLVLWSADNGT 248
           8*******855***766789*************977665 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MLRARAFRQT NGKIVKIQVH PTHPWLVTAD DSDHVSVWNW EHRQVIYELK AGGVDERRLV 60
GAKLEKLAEG ESDYKAKPTE AIRGGSVKQV KFYDDDVRYW QLWRNRSAAA ESPSAVNHLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACACTACCGG AGTTTTTGTT CGGCGATTGT AGTGGTGGTG GTGGATCCGG CCATTTTCTT 60
TGATAACCGC GGTGGATCTA ATCGATCTGG ATCTGATAAT AGCTTTTTTC TGAAATTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0005886--C:plasma membrane

KEGG

aly:ARALYDRAFT_489332

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000321	Aegilops tauschii	61.54	0.00e+00	1010.00
IUUC-Atr-002897	Amborella trichopoda	75.48	0.00e+00	1711.00
IUUC-Ath-007285	Arabidopsis thaliana	99.10	0.00e+00	2253.00
IUUC-Bdi-014824	Brachypodium distachyon	76.51	0.00e+00	1680.00
IUUC-Bol-016428	Brassica oleracea	92.78	0.00e+00	2111.00
IUUC-Bra-017475	Brassica rapa	92.53	0.00e+00	2121.00
IUUC-Gma-043699	Glycine max	81.56	0.00e+00	1842.00
IUUC-Hvu-047404	Hordeum vulgare	81.37	2.00e-135	474.00
IUUC-Mtr-058798	Medicago truncatula	80.77	0.00e+00	1860.00
IUUC-Mac-065076	Musa acuminata	77.03	0.00e+00	1850.00
IUUC-Oba-075727	Oryza barthii	75.15	0.00e+00	1665.00
IUUC-Obr-076460	Oryza brachyantha	76.94	0.00e+00	1729.00
IUUC-Ogl-077837	Oryza glaberrima	77.52	0.00e+00	1746.00
IUUC-Ogu-078912	Oryza glumaepatula	75.15	0.00e+00	1665.00
IUUC-Oin-079644	Oryza indica	77.52	0.00e+00	1742.00
IUUC-Olo-080463	Oryza longistaminata	75.37	0.00e+00	1439.00
IUUC-Ome-081748	Oryza meridionalis	75.15	0.00e+00	1661.00
IUUC-Oni-083096	Oryza nivara	75.15	0.00e+00	1665.00
IUUC-Opu-083280	Oryza punctata	77.44	0.00e+00	1761.00
IUUC-Oru-084728	Oryza rufipogon	75.15	0.00e+00	1661.00
IUUC-Osa-085295	Oryza sativa	77.52	0.00e+00	1742.00
IUUC-Ppa-095297	Physcomitrella patens	58.83	0.00e+00	1290.00
IUUC-Ppe-101567	Prunus persica	77.31	0.00e+00	1900.00
IUUC-Smo-109297	Selaginella moellendorffii	57.96	0.00e+00	1342.00
IUUC-Sit-109913	Setaria italica	76.73	0.00e+00	1729.00
IUUC-Sly-110980	Solanum lycopersicum	80.54	0.00e+00	1751.00
IUUC-Stu-112643	Solanum tuberosum	80.60	0.00e+00	1761.00
IUUC-Sbi-114411	Sorghum bicolor	77.02	0.00e+00	1373.00
IUUC-Ssc-115972	Sus scrofa	33.67	5.00e-07	48.90
IUUC-Tca-121691	Theobroma cacao	83.63	0.00e+00	1917.00
IUUC-Tae-124034	Triticum aestivum	76.76	0.00e+00	1642.00
IUUC-Tur-126798	Triticum urartu	76.33	0.00e+00	821.00
IUUC-Vvi-131320	Vitis vinifera	85.39	0.00e+00	1255.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence