iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093377

Ensembl Protein ID

ENSPSIP00000007264.1

UniProt Accession

K7FGV4; K7FGV4_PELSI

Genbank Protein ID

ENSPSIP00000007264

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01174381

Gene Name

SYVN1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000006560.1	ENSPSIT00000007305.1	ENSPSIP00000007264.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.90e-09	37.9	291	330

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++ +g + lpC+H+fh++Cl  w       +++++CP+Cr
   Q: 291  CIICREEMVTGAKRLPCNHIFHTSCLRSW------FQRQQTCPTCR 330
           ********99999****************......**********8 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MFRSAIMMAA SLALTSAVVA HAYYLKHQFY PTVVYLTKSS PSMAVLYIQA FVLVFLLGKF 60
MGKVFFGQLR AAEMEHLLER SWYAVTETCL AFTVFRDDFS PRFVALFTLL LFLKCFHWLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 60
GGGGTGTAGT TCCCATAGAG GCGAATGAGG GTGGGGTTAC TAGGATGGGT GCGGATGGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR032832--E3_lig_synoviolin/Hrd1
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0000839--C:Hrd1p ubiquitin ligase ERAD-L complex
GO:0016021--C:integral component of membrane
GO:0005654--C:nucleoplasm
GO:0005790--C:smooth endoplasmic reticulum
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0008270--F:zinc ion binding
GO:1902236--P:negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway
GO:0070936--P:protein K48-linked ubiquitination
GO:0018279--P:protein N-linked glycosylation via asparagine
GO:0050821--P:protein stabilization
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0030970--P:retrograde protein transport, ER to cytosol

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000344	Aegilops tauschii	37.57	3.00e-52	199.00
IUUC-Aml-001539	Ailuropoda melanoleuca	97.04	0.00e+00	687.00
IUUC-Atr-002892	Amborella trichopoda	43.88	6.00e-77	281.00
IUUC-Apl-004003	Anas platyrhynchos	94.07	6.00e-65	238.00
IUUC-Aca-004799	Anolis carolinensis	97.81	0.00e+00	663.00
IUUC-Aly-006352	Arabidopsis lyrata	43.88	6.00e-75	274.00
IUUC-Ath-006773	Arabidopsis thaliana	43.88	1.00e-74	273.00
IUUC-Ago-007894	Ashbya gossypii	25.15	3.00e-18	86.70
IUUC-Acl-008041	Aspergillus clavatus	30.96	2.00e-57	216.00
IUUC-Afl-008427	Aspergillus flavus	31.84	7.00e-52	198.00
IUUC-Afu-009023	Aspergillus fumigatus	31.88	1.00e-57	218.00
IUUC-Ani-009133	Aspergillus nidulans	31.75	3.00e-59	223.00
IUUC-Ang-009612	Aspergillus niger	35.55	3.00e-57	216.00
IUUC-Aor-010045	Aspergillus oryzae	31.44	3.00e-58	219.00
IUUC-Ate-010533	Aspergillus terreus	32.33	4.00e-58	219.00
IUUC-Ame-011083	Astyanax mexicanus	93.69	0.00e+00	632.00
IUUC-Bgr-012122	Blumeria graminis	27.85	1.00e-47	184.00
IUUC-Bta-013375	Bos taurus	97.01	0.00e+00	683.00
IUUC-Bci-013675	Botrytis cinerea	36.36	3.00e-23	103.00
IUUC-Bdi-015070	Brachypodium distachyon	42.39	1.00e-68	253.00
IUUC-Bol-015674	Brassica oleracea	42.99	3.00e-74	271.00
IUUC-Bra-017516	Brassica rapa	42.90	3.00e-72	265.00
IUUC-Cel-018422	Caenorhabditis elegans	57.23	3.00e-117	415.00
IUUC-Cja-019779	Callithrix jacchus	94.40	0.00e+00	652.00
IUUC-Cfa-020189	Canis familiaris	97.01	0.00e+00	684.00
IUUC-Cpo-022209	Cavia porcellus	96.75	0.00e+00	684.00
IUUC-Cre-022743	Chlamydomonas reinhardtii	38.92	1.00e-63	236.00
IUUC-Csa-023571	Chlorocebus sabaeus	97.01	0.00e+00	683.00
IUUC-Cho-024889	Choloepus hoffmanni	86.35	2.00e-173	602.00
IUUC-Csv-026160	Ciona savignyi	60.52	3.00e-122	431.00
IUUC-Cne-027002	Cryptococcus neoformans	39.84	2.00e-75	276.00
IUUC-Cme-027285	Cyanidioschyzon merolae	35.82	2.00e-48	186.00
IUUC-Dre-027999	Danio rerio	93.38	0.00e+00	636.00
IUUC-Dno-029250	Dasypus novemcinctus	96.75	0.00e+00	687.00
IUUC-Dor-030718	Dipodomys ordii	92.31	0.00e+00	650.00
IUUC-Dse-031498	Dothistroma septosporum	34.15	4.00e-27	116.00
IUUC-Dme-031969	Drosophila melanogaster	65.45	1.00e-142	499.00
IUUC-Eca-033258	Equus caballus	97.04	0.00e+00	687.00
IUUC-Fca-035980	Felis catus	96.73	0.00e+00	684.00
IUUC-Fal-037554	Ficedula albicollis	68.17	2.00e-100	358.00
IUUC-Fox-037902	Fusarium oxysporum	30.46	1.00e-51	197.00
IUUC-Fso-038418	Fusarium solani	30.46	2.00e-47	184.00
IUUC-Gmo-039288	Gadus morhua	90.85	0.00e+00	629.00
IUUC-Ggr-040076	Gaeumannomyces graminis	30.69	2.00e-48	187.00
IUUC-Gga-040347	Gallus gallus	92.31	2.00e-76	276.00
IUUC-Gac-042347	Gasterosteus aculeatus	93.38	0.00e+00	630.00
IUUC-Gma-044123	Glycine max	45.23	3.00e-74	272.00
IUUC-Ggo-044858	Gorilla gorilla	97.03	0.00e+00	686.00
IUUC-Hsa-046412	Homo sapiens	97.04	0.00e+00	688.00
IUUC-Hvu-047279	Hordeum vulgare	42.99	2.00e-69	255.00
IUUC-Itr-048924	Ictidomys tridecemlineatus	97.01	0.00e+00	682.00
IUUC-Kpa-049117	Komagataella pastoris	28.75	5.00e-30	125.00
IUUC-Lch-049533	Latimeria chalumnae	45.98	1.00e-71	263.00
IUUC-Lpe-051229	Leersia perrieri	32.38	7.00e-34	137.00
IUUC-Loc-052843	Lepisosteus oculatus	92.59	1.00e-121	428.00
IUUC-Lma-052997	Leptosphaeria maculans	33.33	3.00e-60	226.00
IUUC-Laf-053482	Loxodonta africana	97.01	0.00e+00	681.00
IUUC-Mcc-055075	Macaca mulatta	97.04	0.00e+00	688.00
IUUC-Meu-056683	Macropus eugenii	96.58	2.00e-148	518.00
IUUC-Mor-057082	Magnaporthe oryzae	30.85	1.00e-52	201.00
IUUC-Mpo-057573	Magnaporthe poae	29.90	2.00e-48	186.00
IUUC-Mtr-058601	Medicago truncatula	43.88	7.00e-79	287.00
IUUC-Mla-059168	Melampsora laricipopulina	40.11	2.00e-77	283.00
IUUC-Mga-059510	Meleagris gallopavo	97.59	2.00e-46	178.00
IUUC-Mvi-060515	Microbotryum violaceum	41.33	7.00e-66	244.00
IUUC-Mmr-060922	Microcebus murinus	97.03	0.00e+00	684.00
IUUC-Mdo-062491	Monodelphis domestica	96.44	0.00e+00	663.00
IUUC-Mmu-063770	Mus musculus	97.02	0.00e+00	683.00
IUUC-Mac-064789	Musa acuminata	42.99	1.00e-78	286.00
IUUC-Mpu-066107	Mustela putorius furo	96.77	0.00e+00	690.00
IUUC-Mlu-067918	Myotis lucifugus	95.50	9.00e-180	622.00
IUUC-Nfi-068389	Neosartorya fischeri	31.62	6.00e-57	215.00
IUUC-Ncr-068742	Neurospora crassa	32.08	1.00e-49	191.00
IUUC-Nle-069139	Nomascus leucogenys	97.04	0.00e+00	688.00
IUUC-Opr-070898	Ochotona princeps	96.63	2.00e-121	429.00
IUUC-Ont-071991	Oreochromis niloticus	91.08	0.00e+00	638.00
IUUC-Ocu-074065	Oryctolagus cuniculus	96.44	0.00e+00	681.00
IUUC-Oba-075221	Oryza barthii	42.09	1.00e-67	250.00
IUUC-Obr-076914	Oryza brachyantha	43.23	6.00e-64	238.00
IUUC-Ogu-078124	Oryza glumaepatula	42.09	1.00e-67	250.00
IUUC-Oin-080013	Oryza indica	40.42	5.00e-64	238.00
IUUC-Olo-080247	Oryza longistaminata	40.19	2.00e-60	226.00
IUUC-Ome-081769	Oryza meridionalis	42.39	5.00e-70	258.00
IUUC-Oni-082946	Oryza nivara	42.09	1.00e-67	249.00
IUUC-Opu-083268	Oryza punctata	35.90	2.00e-50	192.00
IUUC-Oru-085114	Oryza rufipogon	42.09	1.00e-67	250.00
IUUC-Osa-085829	Oryza sativa	42.69	2.00e-70	259.00
IUUC-Ola-087449	Oryzias latipes	93.33	0.00e+00	629.00
IUUC-Olu-087894	Ostreococcus lucimarinus	42.04	7.00e-74	270.00
IUUC-Oga-089036	Otolemur garnettii	97.01	0.00e+00	682.00
IUUC-Oar-089715	Ovis aries	97.04	0.00e+00	687.00
IUUC-Ptr-091000	Pan troglodytes	97.01	0.00e+00	681.00
IUUC-Pan-092187	Papio anubis	97.04	0.00e+00	687.00
IUUC-Pma-094759	Petromyzon marinus	91.55	1.00e-78	286.00
IUUC-Pno-094883	Phaeosphaeria nodorum	32.62	2.00e-57	217.00
IUUC-Ppa-095684	Physcomitrella patens	44.51	2.00e-71	262.00
IUUC-Pfo-096861	Poecilia formosa	89.91	0.00e+00	633.00
IUUC-Pab-098030	Pongo abelii	97.04	0.00e+00	687.00
IUUC-Pop-099245	Populus trichocarpa	43.29	3.00e-79	289.00
IUUC-Pca-100191	Procavia capensis	93.57	0.00e+00	659.00
IUUC-Ppe-101829	Prunus persica	43.20	1.00e-78	286.00
IUUC-Pva-102689	Pteropus vampyrus	97.04	0.00e+00	688.00
IUUC-Pgr-103286	Puccinia graminis	38.38	9.00e-73	268.00
IUUC-Ptt-103919	Puccinia triticina	38.27	7.00e-71	261.00
IUUC-Pte-104372	Pyrenophora teres	33.25	2.00e-63	237.00
IUUC-Pyt-104456	Pyrenophora triticirepentis	33.00	2.00e-61	230.00
IUUC-Rno-105723	Rattus norvegicus	97.01	0.00e+00	682.00
IUUC-Sce-106348	Saccharomyces cerevisiae	26.55	6.00e-25	108.00
IUUC-Sha-107300	Sarcophilus harrisii	95.90	3.00e-151	528.00
IUUC-Sja-107685	Schizosaccharomyces japonicus	27.27	1.00e-37	150.00
IUUC-Spo-108308	Schizosaccharomyces pombe	30.00	1.00e-38	154.00
IUUC-Ssl-108558	Sclerotinia sclerotiorum	36.36	2.00e-23	103.00
IUUC-Smo-109123	Selaginella moellendorffii	47.32	2.00e-76	279.00
IUUC-Sit-110276	Setaria italica	42.39	3.00e-70	258.00
IUUC-Sly-111819	Solanum lycopersicum	43.89	2.00e-71	263.00
IUUC-Stu-112048	Solanum tuberosum	42.77	4.00e-74	271.00
IUUC-Sbi-114192	Sorghum bicolor	43.23	1.00e-66	246.00
IUUC-Sre-115212	Sporisorium reilianum	36.76	1.00e-62	234.00
IUUC-Ssc-116323	Sus scrofa	96.72	0.00e+00	680.00
IUUC-Tgu-117156	Taeniopygia guttata	93.51	3.00e-39	152.00
IUUC-Tru-118045	Takifugu rubripes	90.15	0.00e+00	637.00
IUUC-Tsy-118823	Tarsius syrichta	84.01	1.00e-155	541.00
IUUC-Tni-120106	Tetraodon nigroviridis	90.91	2.00e-129	455.00
IUUC-Tca-121462	Theobroma cacao	44.67	2.00e-78	286.00
IUUC-Tre-122204	Trichoderma reesei	38.03	2.00e-26	114.00
IUUC-Tvi-122550	Trichoderma virens	30.05	1.00e-49	191.00
IUUC-Tae-125239	Triticum aestivum	43.28	6.00e-72	264.00
IUUC-Tur-126538	Triticum urartu	38.85	2.00e-50	193.00
IUUC-Tme-127197	Tuber melanosporum	40.17	2.00e-67	250.00
IUUC-Tbe-127385	Tupaia belangeri	83.16	8.00e-177	613.00
IUUC-Ttr-128795	Tursiops truncatus	97.03	0.00e+00	686.00
IUUC-Uma-129401	Ustilago maydis	35.31	7.00e-52	198.00
IUUC-Vda-129968	Verticillium dahliae	27.89	3.00e-40	160.00
IUUC-Vvi-130944	Vitis vinifera	46.42	1.00e-78	286.00
IUUC-Xtr-131884	Xenopus tropicalis	94.05	0.00e+00	654.00
IUUC-Xma-133488	Xiphophorus maculatus	89.91	0.00e+00	634.00
IUUC-Yli-134552	Yarrowia lipolytica	25.42	9.00e-36	144.00
IUUC-Zma-135530	Zea mays	43.59	2.00e-67	249.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence