iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ome-081415

Ensembl Protein ID

OMERI01G02550.1

UniProt Accession

A0A0E0BWX6; A0A0E0BWX6_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OMERI01G02550	OMERI01G02550.1	OMERI01G02550.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-17	63.1	193	224

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd..tllvsGsdDgtikvWDl 30
           H+ +vtcl+f ++  + l+sG   g + vWD+
   Q: 193  HQRRVTCLEFhPTknNVLLSGDKKGLLGVWDY 224
           999********444699**************7 PP

Organism

Oryza meridionalis

Protein Sequence
(Fasta)

MGPTTRARFV HNRRRRRRGP YAVSDDDDDE DQQEASSSSS SSDEGEEEEG SGEVDDDEDE 60
AAEPSGKEEE PPVATAAARS GRKASITISL KKVCKVCKST GHEAGFKGAV YIDCPRKPCF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTCGCAAAT TAGATTTCAT TTATGTAATT AGTTTTGTAA GTAGTCTATA TTTAATACTT 60
TAAATTAGTG TCTAAATATA GATACTAAAG TTAATTCCCC TTGGCTAATA TGGGTGTAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006281--P:DNA repair
GO:0010224--P:response to UV-B

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000470	Aegilops tauschii	86.53	0.00e+00	864.00
IUUC-Aml-002203	Ailuropoda melanoleuca	29.63	2.00e-29	122.00
IUUC-Atr-002957	Amborella trichopoda	64.92	0.00e+00	676.00
IUUC-Apl-003832	Anas platyrhynchos	31.35	9.00e-34	137.00
IUUC-Aca-004358	Anolis carolinensis	30.94	4.00e-35	141.00
IUUC-Aly-006296	Arabidopsis lyrata	65.58	0.00e+00	649.00
IUUC-Ath-007115	Arabidopsis thaliana	64.41	0.00e+00	647.00
IUUC-Ame-010817	Astyanax mexicanus	32.66	2.00e-39	155.00
IUUC-Bta-012914	Bos taurus	30.58	2.00e-32	132.00
IUUC-Bdi-014261	Brachypodium distachyon	85.01	0.00e+00	877.00
IUUC-Bol-015317	Brassica oleracea	66.29	0.00e+00	635.00
IUUC-Bra-016848	Brassica rapa	64.61	0.00e+00	635.00
IUUC-Cja-018967	Callithrix jacchus	29.54	5.00e-31	127.00
IUUC-Cfa-021238	Canis familiaris	30.30	1.00e-27	116.00
IUUC-Cpo-022063	Cavia porcellus	29.54	5.00e-30	124.00
IUUC-Csa-023382	Chlorocebus sabaeus	29.23	7.00e-30	124.00
IUUC-Cho-024931	Choloepus hoffmanni	22.50	5.00e-08	52.00
IUUC-Dre-028732	Danio rerio	30.03	2.00e-30	125.00
IUUC-Dno-029575	Dasypus novemcinctus	26.30	5.00e-22	98.60
IUUC-Dor-030461	Dipodomys ordii	33.78	1.00e-26	113.00
IUUC-Ete-033038	Echinops telfairi	29.70	8.00e-30	124.00
IUUC-Eca-033772	Equus caballus	30.56	5.00e-30	124.00
IUUC-Eeu-035234	Erinaceus europaeus	31.58	1.00e-12	67.40
IUUC-Fca-036095	Felis catus	28.92	4.00e-27	115.00
IUUC-Gmo-039683	Gadus morhua	31.44	1.00e-40	160.00
IUUC-Gga-040530	Gallus gallus	31.27	2.00e-34	139.00
IUUC-Gac-041517	Gasterosteus aculeatus	28.97	7.00e-30	124.00
IUUC-Gma-043378	Glycine max	67.22	0.00e+00	692.00
IUUC-Ggo-045364	Gorilla gorilla	29.85	5.00e-31	127.00
IUUC-Hsa-046354	Homo sapiens	29.85	6.00e-31	127.00
IUUC-Hvu-047151	Hordeum vulgare	84.46	3.00e-166	576.00
IUUC-Itr-048304	Ictidomys tridecemlineatus	30.77	3.00e-32	131.00
IUUC-Lpe-051256	Leersia perrieri	86.99	0.00e+00	946.00
IUUC-Loc-052398	Lepisosteus oculatus	30.15	7.00e-34	137.00
IUUC-Laf-053562	Loxodonta africana	30.25	6.00e-31	127.00
IUUC-Mcc-055197	Macaca mulatta	29.86	6.00e-27	114.00
IUUC-Meu-056151	Macropus eugenii	33.57	2.00e-30	125.00
IUUC-Mtr-057940	Medicago truncatula	69.33	0.00e+00	696.00
IUUC-Mga-059923	Meleagris gallopavo	31.90	3.00e-36	145.00
IUUC-Mmr-061465	Microcebus murinus	29.55	2.00e-26	112.00
IUUC-Mdo-063063	Monodelphis domestica	32.93	9.00e-39	153.00
IUUC-Mmu-064294	Mus musculus	29.85	6.00e-31	127.00
IUUC-Mac-065598	Musa acuminata	66.94	0.00e+00	699.00
IUUC-Mpu-066831	Mustela putorius furo	28.92	4.00e-26	111.00
IUUC-Mlu-067222	Myotis lucifugus	30.77	3.00e-30	125.00
IUUC-Nle-069581	Nomascus leucogenys	29.54	6.00e-31	127.00
IUUC-Opr-070644	Ochotona princeps	30.91	1.00e-33	136.00
IUUC-Ont-072605	Oreochromis niloticus	30.67	2.00e-32	132.00
IUUC-Oan-072973	Ornithorhynchus anatinus	33.53	6.00e-38	150.00
IUUC-Ocu-074615	Oryctolagus cuniculus	30.25	3.00e-32	131.00
IUUC-Oba-075283	Oryza barthii	93.54	0.00e+00	959.00
IUUC-Obr-076605	Oryza brachyantha	85.86	0.00e+00	947.00
IUUC-Ogl-077512	Oryza glaberrima	93.20	0.00e+00	968.00
IUUC-Ogu-078329	Oryza glumaepatula	93.71	0.00e+00	960.00
IUUC-Oin-079980	Oryza indica	94.06	0.00e+00	960.00
IUUC-Olo-080516	Oryza longistaminata	96.12	0.00e+00	889.00
IUUC-Oni-082985	Oryza nivara	94.06	0.00e+00	960.00
IUUC-Opu-084159	Oryza punctata	96.06	0.00e+00	937.00
IUUC-Oru-085137	Oryza rufipogon	93.04	0.00e+00	965.00
IUUC-Osa-085614	Oryza sativa	93.04	0.00e+00	964.00
IUUC-Ola-087044	Oryzias latipes	27.41	7.00e-32	130.00
IUUC-Oga-088274	Otolemur garnettii	29.88	2.00e-30	125.00
IUUC-Oar-089826	Ovis aries	30.28	4.00e-32	131.00
IUUC-Ptr-091631	Pan troglodytes	29.85	6.00e-31	127.00
IUUC-Pan-092535	Papio anubis	29.23	1.00e-30	127.00
IUUC-Psi-093815	Pelodiscus sinensis	30.13	2.00e-31	129.00
IUUC-Pma-094474	Petromyzon marinus	31.21	8.00e-34	137.00
IUUC-Ppa-095414	Physcomitrella patens	57.53	1.00e-162	565.00
IUUC-Pfo-096559	Poecilia formosa	28.65	9.00e-32	130.00
IUUC-Pab-098528	Pongo abelii	29.54	7.00e-31	127.00
IUUC-Pop-100064	Populus trichocarpa	69.61	0.00e+00	708.00
IUUC-Pca-100803	Procavia capensis	29.32	3.00e-29	122.00
IUUC-Ppe-101966	Prunus persica	67.67	0.00e+00	682.00
IUUC-Pva-103213	Pteropus vampyrus	30.46	5.00e-31	127.00
IUUC-Rno-105087	Rattus norvegicus	30.09	2.00e-31	129.00
IUUC-Sha-107466	Sarcophilus harrisii	33.84	5.00e-39	154.00
IUUC-Smo-108958	Selaginella moellendorffii	58.72	1.00e-164	572.00
IUUC-Sit-109968	Setaria italica	87.15	0.00e+00	838.00
IUUC-Sly-111495	Solanum lycopersicum	63.44	1.00e-178	619.00
IUUC-Sar-113272	Sorex araneus	31.53	1.00e-32	132.00
IUUC-Sbi-114706	Sorghum bicolor	80.39	0.00e+00	781.00
IUUC-Ssc-115437	Sus scrofa	30.56	2.00e-29	122.00
IUUC-Tgu-116602	Taeniopygia guttata	31.52	2.00e-32	132.00
IUUC-Tru-118698	Takifugu rubripes	30.47	6.00e-28	117.00
IUUC-Tsy-119027	Tarsius syrichta	29.27	7.00e-23	100.00
IUUC-Tni-119787	Tetraodon nigroviridis	29.79	8.00e-35	140.00
IUUC-Tca-121447	Theobroma cacao	67.77	0.00e+00	671.00
IUUC-Tae-123253	Triticum aestivum	86.85	0.00e+00	885.00
IUUC-Tur-126724	Triticum urartu	86.97	0.00e+00	876.00
IUUC-Tbe-127680	Tupaia belangeri	28.72	1.00e-23	103.00
IUUC-Vvi-131001	Vitis vinifera	69.76	0.00e+00	702.00
IUUC-Xtr-132266	Xenopus tropicalis	33.02	1.00e-38	153.00
IUUC-Xma-133034	Xiphophorus maculatus	30.84	1.00e-31	130.00
IUUC-Yli-134341	Yarrowia lipolytica	23.79	1.00e-15	77.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence