iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007010

UUCD1 version

UUC-ArT-01259

Ensembl Protein ID

AT3G11110.1

UniProt Accession

Q9SRM0; B2GVN5; ATL66_ARATH

Genbank Protein ID

AAF01530.1; AAG50960.1; AEE75003.1; ACB88837.1

Protein Name

RING-H2 finger protein ATL66; RING-type E3 ubiquitin transferase ATL66

Genbank Nucleotide ID

AC009991; AC073395; CP002686; BT031381

Gene Name

ATL66; At3g11110; F11B9.7; F9F8.8

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G11110	AT3G11110.1	AT3G11110.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.60e-06	28.7	107	149

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl  f++g   +vlp C H++h +C+ +w       ++e +CPlCr
   Q: 107  CCICLGGFEEGekMKVLPpCSHCYHCECVDRW------LKTESSCPLCR 149
           ********66555666666*************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MTSSSPSPQA SMLLYWHENQ YDDRNFQIHG RTLFFALALF SVVLFFALLT LYIHRNCLPR 60
DSINLHASSP DRLTRCRSGG LDPAEIRSLP VVLCRRERAE EEEEKECCIC LGGFEEGEKM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCTAATATA GTCTTTATTA TTGTTCCTAA ACTAATTAAG ACAAATTAAA ACAATATATA 60
AAGTAACAAA AAAAAATCCC ACTTTCCTTC AAACTTGAGT CTTGCTTGTA CAGACAGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT3G11110

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002564	Amborella trichopoda	41.25	5.00e-21	93.20
IUUC-Aly-006564	Arabidopsis lyrata	86.16	1.00e-69	254.00
IUUC-Bra-016898	Brassica rapa	79.62	8.00e-43	165.00
IUUC-Gma-043125	Glycine max	46.62	3.00e-30	123.00
IUUC-Mtr-058498	Medicago truncatula	43.04	1.00e-21	95.50
IUUC-Pop-099417	Populus trichocarpa	40.50	8.00e-21	91.70
IUUC-Ppe-101926	Prunus persica	40.51	1.00e-18	84.70
IUUC-Sly-110981	Solanum lycopersicum	37.50	1.00e-18	84.70
IUUC-Stu-112286	Solanum tuberosum	41.61	2.00e-19	87.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence