iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ont-072600

Ensembl Protein ID

ENSONIP00000018992.1

UniProt Accession

I3KCZ7; I3KCZ7_ORENI

Genbank Protein ID

ENSONIP00000018992

Protein Name

Eukaryotic translation initiation factor 3 subunit F; Eukaryotic translation initiation factor 3 subunit 5

Genbank Nucleotide ID

AERX01017769

Gene Name

eif3f; EIF3F; EIF3S5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000015090.1	ENSONIT00000019009.1	ENSONIP00000018992.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	80.67	5.00e-131	464.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Oreochromis niloticus

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

GPVVKIHPVV LASICDSYER RNEGASRVIG TLLGTIDKHS IEVTNCFSVP HNESEDEVAV 60
DMEFAKNMYE LHKRVSPTEV IIGWYATGFD ITEHSVLIHE YYSREASNPI HLTVDTALQS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGCCAGTTG TGAAAATTCA TCCCGTCGTT CTCGCTTCTA TCTGCGACTC TTACGAGCGA 60
AGAAATGAGG GAGCGAGTCG TGTGATTGGA ACCCTTTTGG GTAAGTAAAA AGACAATATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	36.14	4.00e-48	185.00
IUUC-Aml-001527	Ailuropoda melanoleuca	80.90	5.00e-132	464.00
IUUC-Atr-002686	Amborella trichopoda	43.35	2.00e-54	206.00
IUUC-Apl-003977	Anas platyrhynchos	80.80	2.00e-109	388.00
IUUC-Aca-004335	Anolis carolinensis	79.55	9.00e-131	459.00
IUUC-Aly-005945	Arabidopsis lyrata	38.40	1.00e-51	196.00
IUUC-Ath-007045	Arabidopsis thaliana	38.78	2.00e-50	192.00
IUUC-Acl-008365	Aspergillus clavatus	34.67	2.00e-42	166.00
IUUC-Afl-008742	Aspergillus flavus	36.13	9.00e-42	164.00
IUUC-Afu-009030	Aspergillus fumigatus	34.67	2.00e-42	166.00
IUUC-Ani-009212	Aspergillus nidulans	35.40	5.00e-43	168.00
IUUC-Ang-009712	Aspergillus niger	34.67	7.00e-42	164.00
IUUC-Aor-009885	Aspergillus oryzae	36.13	2.00e-44	172.00
IUUC-Ate-010315	Aspergillus terreus	35.90	5.00e-41	161.00
IUUC-Ame-010801	Astyanax mexicanus	56.30	4.00e-74	271.00
IUUC-Bgr-011982	Blumeria graminis	33.33	5.00e-41	161.00
IUUC-Bta-012804	Bos taurus	81.04	3.00e-132	465.00
IUUC-Bci-013891	Botrytis cinerea	33.70	2.00e-36	146.00
IUUC-Bdi-014328	Brachypodium distachyon	39.16	9.00e-50	190.00
IUUC-Bol-015446	Brassica oleracea	38.78	4.00e-52	197.00
IUUC-Bra-016862	Brassica rapa	39.16	1.00e-52	199.00
IUUC-Cel-018171	Caenorhabditis elegans	34.27	1.00e-44	172.00
IUUC-Cja-019335	Callithrix jacchus	80.67	3.00e-132	464.00
IUUC-Cfa-020138	Canis familiaris	80.52	2.00e-131	461.00
IUUC-Cpo-022109	Cavia porcellus	71.53	5.00e-113	400.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	43.28	7.00e-66	243.00
IUUC-Csa-023994	Chlorocebus sabaeus	80.67	4.00e-132	464.00
IUUC-Cho-024351	Choloepus hoffmanni	61.42	6.00e-90	324.00
IUUC-Cin-025801	Ciona intestinalis	55.35	4.00e-86	311.00
IUUC-Csv-025805	Ciona savignyi	54.10	3.00e-84	305.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	29.09	2.00e-34	139.00
IUUC-Cne-026868	Cryptococcus neoformans	33.09	4.00e-33	135.00
IUUC-Cme-027328	Cyanidioschyzon merolae	26.98	4.00e-22	98.60
IUUC-Dre-028085	Danio rerio	89.22	8.00e-145	506.00
IUUC-Dno-030099	Dasypus novemcinctus	80.52	2.00e-131	461.00
IUUC-Dor-030324	Dipodomys ordii	72.83	1.00e-113	402.00
IUUC-Dse-031314	Dothistroma septosporum	36.26	7.00e-46	177.00
IUUC-Dme-031926	Drosophila melanogaster	49.26	6.00e-80	290.00
IUUC-Ete-032569	Echinops telfairi	75.84	1.00e-120	426.00
IUUC-Eca-033502	Equus caballus	77.70	4.00e-124	437.00
IUUC-Eeu-034883	Erinaceus europaeus	63.24	3.00e-62	231.00
IUUC-Fca-035873	Felis catus	80.90	7.00e-132	463.00
IUUC-Fal-036921	Ficedula albicollis	81.41	8.00e-134	469.00
IUUC-Fox-037765	Fusarium oxysporum	31.29	4.00e-31	129.00
IUUC-Fso-038240	Fusarium solani	32.37	5.00e-34	138.00
IUUC-Gmo-038864	Gadus morhua	93.68	7.00e-152	529.00
IUUC-Ggr-039862	Gaeumannomyces graminis	29.86	1.00e-30	127.00
IUUC-Gga-040952	Gallus gallus	81.04	7.00e-133	466.00
IUUC-Gac-041677	Gasterosteus aculeatus	94.80	8.00e-153	532.00
IUUC-Gma-043061	Glycine max	40.98	3.00e-50	192.00
IUUC-Ggo-045591	Gorilla gorilla	80.67	3.00e-132	464.00
IUUC-Hsa-046860	Homo sapiens	80.67	4.00e-132	464.00
IUUC-Hvu-047410	Hordeum vulgare	30.14	1.00e-20	92.40
IUUC-Itr-048211	Ictidomys tridecemlineatus	80.52	2.00e-131	461.00
IUUC-Lch-049410	Latimeria chalumnae	70.87	2.00e-83	301.00
IUUC-Lpe-051102	Leersia perrieri	39.61	1.00e-49	189.00
IUUC-Loc-052016	Lepisosteus oculatus	82.90	2.00e-127	448.00
IUUC-Lma-053157	Leptosphaeria maculans	35.90	4.00e-46	178.00
IUUC-Laf-054568	Loxodonta africana	80.30	1.00e-131	462.00
IUUC-Mcc-054613	Macaca mulatta	80.67	3.00e-132	464.00
IUUC-Meu-056832	Macropus eugenii	61.43	5.00e-70	257.00
IUUC-Mor-057104	Magnaporthe oryzae	30.04	2.00e-31	129.00
IUUC-Mtr-058445	Medicago truncatula	39.92	1.00e-60	226.00
IUUC-Mla-059038	Melampsora laricipopulina	31.72	3.00e-34	139.00
IUUC-Mga-059548	Meleagris gallopavo	80.93	2.00e-116	411.00
IUUC-Mvi-060520	Microbotryum violaceum	27.67	1.00e-23	103.00
IUUC-Mdo-062376	Monodelphis domestica	81.65	1.00e-132	466.00
IUUC-Mmu-063254	Mus musculus	80.90	2.00e-131	461.00
IUUC-Mac-065635	Musa acuminata	40.21	3.00e-55	208.00
IUUC-Mpu-066314	Mustela putorius furo	80.90	9.00e-132	462.00
IUUC-Mlu-067512	Myotis lucifugus	80.52	7.00e-131	460.00
IUUC-Nfi-068262	Neosartorya fischeri	34.67	2.00e-42	166.00
IUUC-Ncr-068872	Neurospora crassa	30.91	6.00e-33	134.00
IUUC-Nle-070118	Nomascus leucogenys	80.90	7.00e-132	463.00
IUUC-Opr-071228	Ochotona princeps	80.43	3.00e-115	407.00
IUUC-Oan-073584	Ornithorhynchus anatinus	80.93	3.00e-117	414.00
IUUC-Ocu-074542	Oryctolagus cuniculus	80.90	4.00e-132	464.00
IUUC-Oba-075923	Oryza barthii	39.16	4.00e-51	194.00
IUUC-Obr-076313	Oryza brachyantha	39.61	1.00e-50	193.00
IUUC-Ogl-076932	Oryza glaberrima	39.16	4.00e-51	194.00
IUUC-Ogu-078152	Oryza glumaepatula	39.16	4.00e-51	194.00
IUUC-Oin-079528	Oryza indica	39.16	4.00e-51	194.00
IUUC-Olo-080401	Oryza longistaminata	39.16	4.00e-51	194.00
IUUC-Ome-081553	Oryza meridionalis	39.54	2.00e-51	196.00
IUUC-Oni-082090	Oryza nivara	39.16	4.00e-51	194.00
IUUC-Opu-083583	Oryza punctata	39.61	3.00e-50	192.00
IUUC-Oru-084492	Oryza rufipogon	39.16	4.00e-51	194.00
IUUC-Osa-085383	Oryza sativa	39.16	4.00e-51	194.00
IUUC-Ola-086835	Oryzias latipes	95.91	4.00e-154	536.00
IUUC-Olu-087716	Ostreococcus lucimarinus	29.59	1.00e-30	126.00
IUUC-Oga-088886	Otolemur garnettii	81.27	1.00e-132	466.00
IUUC-Oar-090079	Ovis aries	81.04	2.00e-132	465.00
IUUC-Ptr-091457	Pan troglodytes	80.67	4.00e-132	464.00
IUUC-Pan-092317	Papio anubis	78.38	2.00e-84	304.00
IUUC-Psi-093129	Pelodiscus sinensis	77.22	7.00e-120	423.00
IUUC-Pma-094488	Petromyzon marinus	77.70	2.00e-128	451.00
IUUC-Pno-095049	Phaeosphaeria nodorum	35.90	2.00e-46	179.00
IUUC-Ppa-095341	Physcomitrella patens	43.07	7.00e-67	247.00
IUUC-Pfo-096286	Poecilia formosa	96.28	1.00e-155	542.00
IUUC-Pab-097765	Pongo abelii	80.67	4.00e-132	464.00
IUUC-Pop-099131	Populus trichocarpa	40.30	1.00e-56	213.00
IUUC-Pca-100524	Procavia capensis	67.52	3.00e-88	317.00
IUUC-Ppe-101934	Prunus persica	41.06	9.00e-62	230.00
IUUC-Pva-102577	Pteropus vampyrus	80.15	6.00e-131	460.00
IUUC-Pgr-103521	Puccinia graminis	29.97	8.00e-33	134.00
IUUC-Pte-104304	Pyrenophora teres	35.90	4.00e-46	178.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	35.90	3.00e-46	178.00
IUUC-Rno-105717	Rattus norvegicus	80.90	1.00e-131	462.00
IUUC-Sha-107190	Sarcophilus harrisii	82.38	2.00e-130	458.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	35.00	2.00e-45	176.00
IUUC-Spo-108355	Schizosaccharomyces pombe	36.52	2.00e-46	179.00
IUUC-Smo-109374	Selaginella moellendorffii	45.56	1.00e-69	256.00
IUUC-Sit-110119	Setaria italica	39.16	3.00e-51	195.00
IUUC-Sly-111570	Solanum lycopersicum	37.55	4.00e-50	191.00
IUUC-Stu-112308	Solanum tuberosum	40.08	1.00e-56	213.00
IUUC-Sar-113515	Sorex araneus	75.53	3.00e-39	154.00
IUUC-Sbi-114605	Sorghum bicolor	39.16	5.00e-51	195.00
IUUC-Sre-114906	Sporisorium reilianum	40.88	3.00e-56	211.00
IUUC-Tgu-117087	Taeniopygia guttata	80.08	1.00e-114	405.00
IUUC-Tru-117700	Takifugu rubripes	91.82	4.00e-151	526.00
IUUC-Tni-120470	Tetraodon nigroviridis	94.42	5.00e-153	533.00
IUUC-Tca-121109	Theobroma cacao	40.30	4.00e-50	191.00
IUUC-Tre-122095	Trichoderma reesei	33.21	7.00e-34	137.00
IUUC-Tvi-122580	Trichoderma virens	32.85	4.00e-33	135.00
IUUC-Tae-125129	Triticum aestivum	39.16	1.00e-52	199.00
IUUC-Tur-126658	Triticum urartu	34.07	2.00e-43	169.00
IUUC-Tme-127043	Tuber melanosporum	37.50	1.00e-47	183.00
IUUC-Tbe-127927	Tupaia belangeri	80.90	7.00e-132	463.00
IUUC-Ttr-129231	Tursiops truncatus	81.27	2.00e-132	465.00
IUUC-Uma-129578	Ustilago maydis	40.15	4.00e-54	205.00
IUUC-Vda-129730	Verticillium dahliae	30.80	9.00e-38	150.00
IUUC-Vpa-130677	Vicugna pacos	50.37	2.00e-29	123.00
IUUC-Vvi-130968	Vitis vinifera	41.44	7.00e-57	214.00
IUUC-Xtr-132203	Xenopus tropicalis	81.04	3.00e-131	460.00
IUUC-Xma-133972	Xiphophorus maculatus	96.65	1.00e-155	541.00
IUUC-Yli-134553	Yarrowia lipolytica	36.13	3.00e-43	168.00
IUUC-Zma-134941	Zea mays	40.00	2.00e-47	182.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence