iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099599

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000344

Gene Name

POPTRDRAFT_563889; POPTR_0008s05430g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0008s05430	POPTR_0008s05430.1	POPTR_0008s05430.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.80e-07	32.1	85	127

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl df++g  ++ lp C H +h  C+ +w       + + +CP Cr
   Q: 85   CAICLGDFEEGeqLRELPeCLHSYHVACIDMW------LYSHSSCPMCR 127
           ********66555888889*************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSDDDNDDLN SKVAVLLIGV GAAAIVATIY HCLVMTWCCR YRARPNPQEP QLHVNETILE 60
NSTAQVIPSY EYRKDTGLTG DNGTCAICLG DFEEGEQLRE LPECLHSYHV ACIDMWLYSH 120

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Nucleotide Sequence
(Fasta)

ATGTCAGACG ACGATAATGA TGACCTTAAT TCCAAAGTTG CCGTTCTTCT AATTGGGGTT 60
GGAGCAGCAG CTATTGTGGC AACAATTTAC CACTGCCTCG TCATGACTTG GTGCTGCCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0008s05430g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043484	Glycine max	43.62	1.00e-22	99.00
IUUC-Mtr-058712	Medicago truncatula	46.88	2.00e-27	114.00
IUUC-Oba-075631	Oryza barthii	47.69	2.00e-17	81.60
IUUC-Ogu-078537	Oryza glumaepatula	47.69	2.00e-17	81.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence