iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099795

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000341

Gene Name

POPTRDRAFT_759973; POPTR_0005s06320g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s06320	POPTR_0005s06320.1	POPTR_0005s06320.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.20e-08	35.0	180	221

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg...plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +C+e+++ g   ++ +pC Hv+h dC+ +w       +++ +CPlCr
   Q: 180  CTVCMEEIEAGseaTR-MPCSHVYHSDCIVQW------LQTSHLCPLCR 221
           9*******55533266.99*************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAIWIKYSSC VNFKPQENHQ ESQRHMIIGQ PLHEEDSMLR VLFSLYKFYF LGNLTGGSMF 60
TTRPVKINSK ETCIPITSSL VDDHDQEFKE ILTVMGVPGR KQSKILRKMA SLARSKGTFS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTATTT GGATCAAATA CAGTTCTTGT GTAAACTTTA AACCACAAGA AAATCATCAA 60
GAATCACAAC GACACATGAT CATTGGCCAG CCCCTGCACG AGGAAGATTC GATGTTGCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0005s06320g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043008	Glycine max	40.00	7.00e-21	93.60
IUUC-Mtr-058523	Medicago truncatula	48.57	2.00e-20	89.40
IUUC-Olo-080618	Oryza longistaminata	47.22	8.00e-18	82.80
IUUC-Ome-081671	Oryza meridionalis	54.90	6.00e-15	73.90
IUUC-Oru-084388	Oryza rufipogon	47.22	8.00e-18	82.80
IUUC-Osa-086022	Oryza sativa	47.22	8.00e-18	82.80
IUUC-Sly-111034	Solanum lycopersicum	34.71	2.00e-21	95.10
IUUC-Stu-112375	Solanum tuberosum	35.54	3.00e-21	93.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence