iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121010

Ensembl Protein ID

EOY19349

UniProt Accession

A0A061FX18; A0A061FX18_THECC

Genbank Protein ID

EOY19349.1

Protein Name

Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

CM001888

Gene Name

TCM_044422

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_044422	EOY19349	EOY19349

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-15	57.8	26	54

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclaf..sdtllvsGsdDgtikvWDlrt 32
           + c+af   +tll++G+ Dg++ +WD+ t
   Q: 26   MKCIAFnrRGTLLAAGCSDGSCVIWDFET 54
           68****9766****************765 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MNAPIIDPLQ GDFPEVIEEY LEHGVMKCIA FNRRGTLLAA GCSDGSCVIW DFETRGIAKE 60
LRDRDCTAAI TSVCWSKYGH RILVSAADKS LTLWDVVSGE KVTRIVLQQT PLQARLHPGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAATTAATA ATAAGGGTTA ATAACCATGC TCCAATGTCT CTCTCTTGCA TGTGGCTCTG 60
TGGAAAAAAC ATGAGAAAAA GACAAAAGGC TACATAAGAA CCGGGAAGGT TTCAACTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0048188--C:Set1C/COMPASS complex
GO:0010228--P:vegetative to reproductive phase transition of meristem

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000616	Aegilops tauschii	63.83	0.00e+00	632.00
IUUC-Aml-002118	Ailuropoda melanoleuca	38.60	9.00e-62	230.00
IUUC-Atr-002777	Amborella trichopoda	67.66	0.00e+00	707.00
IUUC-Apl-004056	Anas platyrhynchos	35.35	1.00e-61	229.00
IUUC-Aca-004999	Anolis carolinensis	38.37	3.00e-61	228.00
IUUC-Aly-006092	Arabidopsis lyrata	71.43	0.00e+00	736.00
IUUC-Ath-006947	Arabidopsis thaliana	73.47	0.00e+00	742.00
IUUC-Ago-007753	Ashbya gossypii	28.83	5.00e-33	134.00
IUUC-Acl-008105	Aspergillus clavatus	32.25	2.00e-47	182.00
IUUC-Afl-008633	Aspergillus flavus	33.41	1.00e-46	179.00
IUUC-Afu-009075	Aspergillus fumigatus	35.66	4.00e-26	111.00
IUUC-Ani-009233	Aspergillus nidulans	33.03	2.00e-50	192.00
IUUC-Ang-009695	Aspergillus niger	34.10	4.00e-50	191.00
IUUC-Aor-009988	Aspergillus oryzae	33.41	1.00e-46	179.00
IUUC-Ate-010313	Aspergillus terreus	33.18	2.00e-47	182.00
IUUC-Ame-011134	Astyanax mexicanus	33.79	9.00e-49	187.00
IUUC-Bgr-012302	Blumeria graminis	34.64	7.00e-47	180.00
IUUC-Bta-012946	Bos taurus	37.55	9.00e-63	233.00
IUUC-Bci-013968	Botrytis cinerea	34.75	1.00e-51	196.00
IUUC-Bdi-014387	Brachypodium distachyon	63.44	3.00e-173	600.00
IUUC-Bra-017414	Brassica rapa	72.24	0.00e+00	738.00
IUUC-Cel-018610	Caenorhabditis elegans	31.13	2.00e-46	179.00
IUUC-Cja-019938	Callithrix jacchus	35.54	1.00e-61	229.00
IUUC-Cfa-020726	Canis familiaris	37.55	1.00e-62	233.00
IUUC-Cpo-021560	Cavia porcellus	35.91	2.00e-51	195.00
IUUC-Cre-022588	Chlamydomonas reinhardtii	33.59	1.00e-34	139.00
IUUC-Csa-024192	Chlorocebus sabaeus	37.55	9.00e-63	233.00
IUUC-Cho-024355	Choloepus hoffmanni	37.55	2.00e-62	232.00
IUUC-Cin-025285	Ciona intestinalis	35.23	8.00e-61	227.00
IUUC-Csv-026366	Ciona savignyi	34.20	1.00e-58	219.00
IUUC-Cgl-026450	Colletotrichum gloeosporioides	32.92	8.00e-43	167.00
IUUC-Cne-027092	Cryptococcus neoformans	32.51	4.00e-44	171.00
IUUC-Cme-027137	Cyanidioschyzon merolae	29.09	4.00e-23	102.00
IUUC-Dre-027374	Danio rerio	36.92	5.00e-62	231.00
IUUC-Dno-030003	Dasypus novemcinctus	37.70	2.00e-56	212.00
IUUC-Dor-030355	Dipodomys ordii	37.55	1.00e-62	233.00
IUUC-Dse-031442	Dothistroma septosporum	32.27	4.00e-48	184.00
IUUC-Dme-031932	Drosophila melanogaster	36.31	9.00e-67	246.00
IUUC-Ete-032858	Echinops telfairi	36.63	2.00e-41	162.00
IUUC-Eca-034217	Equus caballus	34.96	6.00e-63	234.00
IUUC-Eeu-035024	Erinaceus europaeus	36.92	3.00e-60	225.00
IUUC-Fca-035370	Felis catus	38.60	1.00e-61	230.00
IUUC-Fal-036628	Ficedula albicollis	38.60	6.00e-61	227.00
IUUC-Fox-037739	Fusarium oxysporum	29.72	2.00e-48	186.00
IUUC-Fso-038094	Fusarium solani	32.69	1.00e-47	183.00
IUUC-Gmo-039088	Gadus morhua	37.38	8.00e-61	227.00
IUUC-Ggr-040063	Gaeumannomyces graminis	31.66	2.00e-45	176.00
IUUC-Gga-041160	Gallus gallus	37.55	8.00e-63	233.00
IUUC-Gac-041333	Gasterosteus aculeatus	38.83	2.00e-61	229.00
IUUC-Gma-042999	Glycine max	77.88	0.00e+00	772.00
IUUC-Ggo-044657	Gorilla gorilla	37.55	9.00e-63	233.00
IUUC-Hsa-045894	Homo sapiens	37.55	9.00e-63	233.00
IUUC-Hvu-047662	Hordeum vulgare	62.95	0.00e+00	654.00
IUUC-Itr-048125	Ictidomys tridecemlineatus	39.07	3.00e-61	228.00
IUUC-Kpa-049095	Komagataella pastoris	31.22	1.00e-38	153.00
IUUC-Lch-049495	Latimeria chalumnae	32.15	3.00e-29	122.00
IUUC-Lpe-051038	Leersia perrieri	62.57	9.00e-179	619.00
IUUC-Loc-052680	Lepisosteus oculatus	36.07	4.00e-64	238.00
IUUC-Laf-053717	Loxodonta africana	38.60	1.00e-61	229.00
IUUC-Mcc-055007	Macaca mulatta	39.07	2.00e-61	229.00
IUUC-Meu-056494	Macropus eugenii	48.47	1.00e-18	87.40
IUUC-Mor-057173	Magnaporthe oryzae	32.10	2.00e-43	169.00
IUUC-Mpo-057622	Magnaporthe poae	31.59	2.00e-45	176.00
IUUC-Mtr-057672	Medicago truncatula	72.33	0.00e+00	770.00
IUUC-Mla-059057	Melampsora laricipopulina	29.35	3.00e-36	145.00
IUUC-Mga-060037	Meleagris gallopavo	38.43	3.00e-60	225.00
IUUC-Mvi-060321	Microbotryum violaceum	34.52	2.00e-47	182.00
IUUC-Mmr-060755	Microcebus murinus	38.60	9.00e-62	230.00
IUUC-Mdo-061859	Monodelphis domestica	37.55	1.00e-62	233.00
IUUC-Mmu-063755	Mus musculus	34.96	7.00e-63	234.00
IUUC-Mac-065292	Musa acuminata	70.25	0.00e+00	768.00
IUUC-Mpu-065896	Mustela putorius furo	34.78	1.00e-62	233.00
IUUC-Mlu-067927	Myotis lucifugus	38.60	8.00e-62	230.00
IUUC-Nfi-068429	Neosartorya fischeri	32.38	3.00e-47	181.00
IUUC-Ncr-068738	Neurospora crassa	34.32	5.00e-52	197.00
IUUC-Nle-069608	Nomascus leucogenys	37.55	9.00e-63	233.00
IUUC-Opr-070319	Ochotona princeps	38.37	8.00e-61	227.00
IUUC-Ont-071451	Oreochromis niloticus	36.07	1.00e-63	236.00
IUUC-Oan-073445	Ornithorhynchus anatinus	38.34	3.00e-60	224.00
IUUC-Ocu-074341	Oryctolagus cuniculus	37.55	9.00e-63	233.00
IUUC-Oba-075664	Oryza barthii	61.81	0.00e+00	643.00
IUUC-Obr-076630	Oryza brachyantha	62.03	0.00e+00	627.00
IUUC-Ogl-077847	Oryza glaberrima	61.59	0.00e+00	641.00
IUUC-Ogu-077970	Oryza glumaepatula	61.15	3.00e-172	597.00
IUUC-Oin-079374	Oryza indica	61.81	0.00e+00	642.00
IUUC-Olo-080992	Oryza longistaminata	61.63	0.00e+00	641.00
IUUC-Ome-081683	Oryza meridionalis	61.68	5.00e-176	610.00
IUUC-Oni-082594	Oryza nivara	61.81	0.00e+00	642.00
IUUC-Opu-083907	Oryza punctata	62.57	0.00e+00	649.00
IUUC-Oru-084400	Oryza rufipogon	61.81	0.00e+00	643.00
IUUC-Osa-085442	Oryza sativa	61.81	0.00e+00	643.00
IUUC-Ola-086569	Oryzias latipes	37.55	3.00e-62	231.00
IUUC-Oga-088947	Otolemur garnettii	36.26	3.00e-54	205.00
IUUC-Oar-090358	Ovis aries	38.37	2.00e-61	229.00
IUUC-Ptr-091601	Pan troglodytes	37.55	7.00e-63	234.00
IUUC-Pan-092466	Papio anubis	37.55	9.00e-63	233.00
IUUC-Psi-093614	Pelodiscus sinensis	35.46	7.00e-62	230.00
IUUC-Pma-094450	Petromyzon marinus	39.21	3.00e-61	228.00
IUUC-Pno-094819	Phaeosphaeria nodorum	29.66	6.00e-43	167.00
IUUC-Ppa-095157	Physcomitrella patens	59.26	6.00e-70	256.00
IUUC-Pfo-096312	Poecilia formosa	38.20	3.00e-63	235.00
IUUC-Pab-098058	Pongo abelii	37.55	9.00e-63	233.00
IUUC-Pop-099039	Populus trichocarpa	82.55	0.00e+00	884.00
IUUC-Pca-100623	Procavia capensis	36.92	3.00e-60	225.00
IUUC-Ppe-102053	Prunus persica	84.57	0.00e+00	865.00
IUUC-Pva-102779	Pteropus vampyrus	36.41	1.00e-58	219.00
IUUC-Pgr-103398	Puccinia graminis	31.91	4.00e-44	171.00
IUUC-Ptt-103912	Puccinia triticina	32.91	8.00e-46	177.00
IUUC-Pte-104246	Pyrenophora teres	30.21	1.00e-45	176.00
IUUC-Pyt-104582	Pyrenophora triticirepentis	30.21	8.00e-46	177.00
IUUC-Rno-104838	Rattus norvegicus	37.55	9.00e-63	233.00
IUUC-Sce-106229	Saccharomyces cerevisiae	28.78	4.00e-32	131.00
IUUC-Sha-106527	Sarcophilus harrisii	37.55	1.00e-62	233.00
IUUC-Sja-107862	Schizosaccharomyces japonicus	34.66	2.00e-50	192.00
IUUC-Spo-108025	Schizosaccharomyces pombe	36.19	4.00e-51	194.00
IUUC-Ssl-108544	Sclerotinia sclerotiorum	34.99	1.00e-51	196.00
IUUC-Smo-109474	Selaginella moellendorffii	49.42	2.00e-123	435.00
IUUC-Sit-110687	Setaria italica	63.41	3.00e-174	604.00
IUUC-Sly-111597	Solanum lycopersicum	73.81	0.00e+00	746.00
IUUC-Stu-112389	Solanum tuberosum	74.43	0.00e+00	758.00
IUUC-Sar-113284	Sorex araneus	35.17	3.00e-47	182.00
IUUC-Sbi-114362	Sorghum bicolor	60.04	3.00e-173	600.00
IUUC-Sre-115146	Sporisorium reilianum	29.49	1.00e-39	156.00
IUUC-Ssc-115604	Sus scrofa	38.60	1.00e-61	230.00
IUUC-Tru-118258	Takifugu rubripes	37.77	1.00e-62	233.00
IUUC-Tsy-119169	Tarsius syrichta	35.91	1.00e-51	196.00
IUUC-Tni-119939	Tetraodon nigroviridis	37.69	1.00e-61	229.00
IUUC-Tre-121944	Trichoderma reesei	32.85	2.00e-47	182.00
IUUC-Tvi-122283	Trichoderma virens	33.01	2.00e-47	182.00
IUUC-Tur-126395	Triticum urartu	64.34	0.00e+00	653.00
IUUC-Tme-127150	Tuber melanosporum	32.56	6.00e-52	197.00
IUUC-Tbe-127745	Tupaia belangeri	34.11	6.00e-28	117.00
IUUC-Ttr-129187	Tursiops truncatus	36.92	4.00e-60	224.00
IUUC-Uma-129654	Ustilago maydis	35.71	1.00e-26	114.00
IUUC-Vda-129788	Verticillium dahliae	32.27	2.00e-49	188.00
IUUC-Vpa-130182	Vicugna pacos	37.05	3.00e-47	182.00
IUUC-Vvi-131557	Vitis vinifera	83.03	0.00e+00	896.00
IUUC-Xtr-132007	Xenopus tropicalis	38.20	2.00e-64	239.00
IUUC-Xma-133909	Xiphophorus maculatus	38.20	6.00e-63	234.00
IUUC-Yli-134524	Yarrowia lipolytica	32.65	4.00e-47	181.00
IUUC-Zma-134821	Zea mays	59.86	7.00e-177	612.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence