iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121347

Ensembl Protein ID

EOY19874

UniProt Accession

A0A061FYJ3; A0A061FYJ3_THECC

Genbank Protein ID

EOY19874.1

Protein Name

Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

CM001888

Gene Name

TCM_045257

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_045257	EOY19874	EOY19874

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.70e-33	112.2	224	258
UBD/Beta-Prp	4.60e-57	194.4	136	340

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgv 34
           H++sv++l+f  +d  ++s+sdD t+kvWD+ ++ 
   Q: 224  HKESVRDLSFcrTDLKFCSCSDDTTVKVWDFARCQ 258
           9**********877889*************87665 PP

UBD/Beta-Prp

   S: 47   slsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhp 147
           sl ++   ++ v + p+g  l+tgs+ +   +w+ +++   ++l++h++ ++s+ +s +++++vsG++   i+ w+ + + +    +s h+++v+ +++  
   Q: 136  SLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKF-NKSAHKESVRDLSFCR 235
           567777788899999999999999999999999999999999999999999999999999999999999999999888777776.8999999999999999 PP
   S: 148  dgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiri 248
           ++  + s+s+D+tv++Wd ++ +  r ltg h  +v+s+++++++  lvsg++d+ vklwd +tg+ + +++gh+++v++v+  +n+++++++++D+ i++
   Q: 236  TDLKFCSCSDDTTVKVWDFARCQEERSLTG-HGWDVKSVDWHPTKSLLVSGGKDNLVKLWDAKTGRELCSFHGHKNTVLCVKWNQNGNWVLTAAKDQIIKL 335
           999999999999999999999999999998.9999999999999999999999999999999999999999999999999999999999999999999999 PP
   S: 249  Wdlrs 253
           +d+r 
   Q: 336  YDIRA 340
           99875 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MMYGDPQQQQ NQPPPSQGGE FPRGPPPPPP QMMRQPSASS TTLNSEYHHP APPQIPPYDA 60
HGDNFAAKRM RKLTQRRAVD YTSTVVRYMQ IRMWQRDSRD RTVLQPTPAA AIDVLPTAAY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGTTTGGTGG AACTTACGAC CCGACTTCGA ACTACACGGT CAAAAACAAC CCTACAGTCA 60
ATACTCTCTT TCCCGCTCCC AAAATCCACC AAAAATGAAA TTCTGGGTTT AGGGTTTTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001064	Aegilops tauschii	73.18	0.00e+00	716.00
IUUC-Aml-001363	Ailuropoda melanoleuca	49.45	2.00e-134	473.00
IUUC-Atr-003030	Amborella trichopoda	80.48	0.00e+00	761.00
IUUC-Apl-003409	Anas platyrhynchos	51.04	3.00e-133	469.00
IUUC-Aca-004694	Anolis carolinensis	51.04	7.00e-134	471.00
IUUC-Aly-006063	Arabidopsis lyrata	78.83	0.00e+00	764.00
IUUC-Ath-006583	Arabidopsis thaliana	75.00	0.00e+00	762.00
IUUC-Ago-007805	Ashbya gossypii	40.09	1.00e-88	319.00
IUUC-Acl-008075	Aspergillus clavatus	40.60	6.00e-93	334.00
IUUC-Afl-008582	Aspergillus flavus	41.71	1.00e-90	326.00
IUUC-Afu-008817	Aspergillus fumigatus	39.34	7.00e-80	290.00
IUUC-Ani-009391	Aspergillus nidulans	38.90	3.00e-82	298.00
IUUC-Ang-009750	Aspergillus niger	43.32	3.00e-75	274.00
IUUC-Aor-010085	Aspergillus oryzae	40.59	8.00e-93	333.00
IUUC-Ate-010397	Aspergillus terreus	39.17	1.00e-92	333.00
IUUC-Ame-010741	Astyanax mexicanus	54.18	7.00e-81	295.00
IUUC-Bgr-012169	Blumeria graminis	47.54	4.00e-100	357.00
IUUC-Bta-013265	Bos taurus	51.28	2.00e-134	473.00
IUUC-Bci-013762	Botrytis cinerea	44.09	3.00e-100	358.00
IUUC-Bdi-014849	Brachypodium distachyon	79.64	0.00e+00	756.00
IUUC-Bol-015325	Brassica oleracea	76.33	0.00e+00	758.00
IUUC-Bra-017064	Brassica rapa	78.28	0.00e+00	769.00
IUUC-Cel-018378	Caenorhabditis elegans	45.14	3.00e-115	408.00
IUUC-Cja-019547	Callithrix jacchus	51.28	8.00e-135	474.00
IUUC-Cfa-020031	Canis familiaris	51.28	1.00e-134	473.00
IUUC-Cpo-021554	Cavia porcellus	50.71	3.00e-130	459.00
IUUC-Cre-022830	Chlamydomonas reinhardtii	42.27	2.00e-76	278.00
IUUC-Csa-023146	Chlorocebus sabaeus	51.04	3.00e-134	473.00
IUUC-Cho-024679	Choloepus hoffmanni	51.30	1.00e-120	427.00
IUUC-Cin-025415	Ciona intestinalis	52.52	4.00e-124	437.00
IUUC-Csv-026003	Ciona savignyi	46.83	1.00e-120	425.00
IUUC-Cgl-026391	Colletotrichum gloeosporioides	45.45	1.00e-98	352.00
IUUC-Cne-026983	Cryptococcus neoformans	41.49	2.00e-94	339.00
IUUC-Cme-027147	Cyanidioschyzon merolae	49.74	7.00e-114	403.00
IUUC-Dre-028545	Danio rerio	50.00	3.00e-136	478.00
IUUC-Dno-029677	Dasypus novemcinctus	50.69	6.00e-135	474.00
IUUC-Dse-031371	Dothistroma septosporum	44.95	1.00e-95	342.00
IUUC-Dme-031663	Drosophila melanogaster	48.18	3.00e-136	478.00
IUUC-Ete-032511	Echinops telfairi	45.24	2.00e-112	400.00
IUUC-Eca-034152	Equus caballus	51.28	2.00e-134	473.00
IUUC-Eeu-034560	Erinaceus europaeus	42.21	8.00e-45	175.00
IUUC-Fca-035820	Felis catus	51.28	2.00e-134	473.00
IUUC-Fox-037958	Fusarium oxysporum	46.43	6.00e-99	353.00
IUUC-Fso-038162	Fusarium solani	46.15	2.00e-98	352.00
IUUC-Gmo-039708	Gadus morhua	50.57	2.00e-133	469.00
IUUC-Ggr-040031	Gaeumannomyces graminis	42.21	2.00e-90	325.00
IUUC-Gga-040963	Gallus gallus	51.28	1.00e-134	473.00
IUUC-Gac-041541	Gasterosteus aculeatus	50.23	7.00e-130	457.00
IUUC-Gma-043757	Glycine max	87.21	0.00e+00	844.00
IUUC-Ggo-045564	Gorilla gorilla	51.28	1.00e-134	473.00
IUUC-Hsa-045833	Homo sapiens	51.28	1.00e-134	473.00
IUUC-Hvu-047848	Hordeum vulgare	79.27	9.00e-159	552.00
IUUC-Itr-048083	Ictidomys tridecemlineatus	51.28	1.00e-134	474.00
IUUC-Kpa-049308	Komagataella pastoris	40.62	2.00e-88	318.00
IUUC-Lch-050525	Latimeria chalumnae	51.51	3.00e-134	472.00
IUUC-Lpe-051364	Leersia perrieri	77.40	0.00e+00	735.00
IUUC-Loc-052696	Lepisosteus oculatus	51.03	4.00e-136	478.00
IUUC-Lma-052951	Leptosphaeria maculans	47.55	3.00e-100	358.00
IUUC-Laf-053653	Loxodonta africana	51.28	2.00e-134	473.00
IUUC-Mcc-055797	Macaca mulatta	51.28	1.00e-134	474.00
IUUC-Meu-056331	Macropus eugenii	53.58	6.00e-103	368.00
IUUC-Mor-057168	Magnaporthe oryzae	41.98	2.00e-93	335.00
IUUC-Mpo-057510	Magnaporthe poae	45.63	4.00e-65	240.00
IUUC-Mtr-058032	Medicago truncatula	85.02	0.00e+00	803.00
IUUC-Mla-058852	Melampsora laricipopulina	49.35	8.00e-112	396.00
IUUC-Mga-059311	Meleagris gallopavo	51.28	1.00e-134	473.00
IUUC-Mvi-060544	Microbotryum violaceum	50.40	2.00e-115	408.00
IUUC-Mmr-061143	Microcebus murinus	51.28	1.00e-134	473.00
IUUC-Mdo-061977	Monodelphis domestica	51.28	2.00e-134	473.00
IUUC-Mmu-063922	Mus musculus	51.28	1.00e-134	473.00
IUUC-Mac-064961	Musa acuminata	86.62	0.00e+00	856.00
IUUC-Mpu-066079	Mustela putorius furo	53.07	7.00e-119	421.00
IUUC-Mlu-067247	Myotis lucifugus	49.45	2.00e-134	473.00
IUUC-Nfi-068255	Neosartorya fischeri	41.64	7.00e-88	317.00
IUUC-Ncr-068909	Neurospora crassa	45.57	2.00e-102	365.00
IUUC-Nle-068994	Nomascus leucogenys	51.28	1.00e-134	473.00
IUUC-Opr-071079	Ochotona princeps	51.28	7.00e-135	474.00
IUUC-Ont-071971	Oreochromis niloticus	51.03	2.00e-134	472.00
IUUC-Oan-073135	Ornithorhynchus anatinus	51.40	3.00e-120	426.00
IUUC-Ocu-073982	Oryctolagus cuniculus	51.28	3.00e-134	472.00
IUUC-Oba-075297	Oryza barthii	76.32	0.00e+00	756.00
IUUC-Obr-076641	Oryza brachyantha	82.53	0.00e+00	778.00
IUUC-Ogl-077539	Oryza glaberrima	82.93	1.00e-171	595.00
IUUC-Ogu-078807	Oryza glumaepatula	76.32	0.00e+00	756.00
IUUC-Oin-079229	Oryza indica	83.00	0.00e+00	806.00
IUUC-Olo-080371	Oryza longistaminata	78.39	0.00e+00	730.00
IUUC-Ome-081149	Oryza meridionalis	75.69	0.00e+00	749.00
IUUC-Oni-082970	Oryza nivara	76.11	0.00e+00	755.00
IUUC-Opu-083415	Oryza punctata	75.48	0.00e+00	748.00
IUUC-Oru-085236	Oryza rufipogon	76.11	0.00e+00	754.00
IUUC-Ola-087421	Oryzias latipes	51.37	9.00e-135	473.00
IUUC-Olu-087821	Ostreococcus lucimarinus	54.12	3.00e-120	424.00
IUUC-Oga-088132	Otolemur garnettii	51.28	1.00e-134	474.00
IUUC-Oar-089513	Ovis aries	51.28	2.00e-134	473.00
IUUC-Ptr-090717	Pan troglodytes	51.28	1.00e-134	474.00
IUUC-Pan-092108	Papio anubis	51.28	1.00e-134	474.00
IUUC-Psi-093892	Pelodiscus sinensis	51.28	4.00e-134	472.00
IUUC-Pma-094561	Petromyzon marinus	57.18	3.00e-135	475.00
IUUC-Pno-094943	Phaeosphaeria nodorum	44.06	1.00e-100	359.00
IUUC-Ppa-095359	Physcomitrella patens	73.35	0.00e+00	664.00
IUUC-Pfo-096516	Poecilia formosa	51.04	3.00e-132	465.00
IUUC-Pab-097759	Pongo abelii	51.28	1.00e-134	474.00
IUUC-Pop-099553	Populus trichocarpa	86.28	0.00e+00	858.00
IUUC-Ppe-101957	Prunus persica	91.63	0.00e+00	840.00
IUUC-Pva-102918	Pteropus vampyrus	49.45	2.00e-134	473.00
IUUC-Pgr-103594	Puccinia graminis	50.67	3.00e-114	405.00
IUUC-Ptt-103879	Puccinia triticina	45.33	1.00e-97	350.00
IUUC-Pte-104419	Pyrenophora teres	45.07	6.00e-102	363.00
IUUC-Pyt-104718	Pyrenophora triticirepentis	46.98	1.00e-99	356.00
IUUC-Rno-105838	Rattus norvegicus	51.28	1.00e-134	473.00
IUUC-Sce-106331	Saccharomyces cerevisiae	37.56	3.00e-84	304.00
IUUC-Sha-107435	Sarcophilus harrisii	51.04	1.00e-132	467.00
IUUC-Sja-107796	Schizosaccharomyces japonicus	43.42	2.00e-97	348.00
IUUC-Spo-108163	Schizosaccharomyces pombe	44.17	4.00e-102	364.00
IUUC-Smo-109602	Selaginella moellendorffii	71.56	0.00e+00	668.00
IUUC-Sit-109729	Setaria italica	78.86	0.00e+00	768.00
IUUC-Sly-111679	Solanum lycopersicum	83.44	0.00e+00	840.00
IUUC-Sar-113157	Sorex araneus	49.45	3.00e-134	472.00
IUUC-Sbi-114853	Sorghum bicolor	80.09	0.00e+00	771.00
IUUC-Sre-115085	Sporisorium reilianum	39.55	2.00e-95	342.00
IUUC-Ssc-116286	Sus scrofa	49.34	5.00e-133	468.00
IUUC-Tgu-117219	Taeniopygia guttata	51.28	1.00e-134	473.00
IUUC-Tru-117550	Takifugu rubripes	50.57	8.00e-133	466.00
IUUC-Tsy-119294	Tarsius syrichta	49.45	6.00e-135	474.00
IUUC-Tni-120561	Tetraodon nigroviridis	51.03	2.00e-135	476.00
IUUC-Tre-122018	Trichoderma reesei	43.75	6.00e-101	360.00
IUUC-Tvi-122413	Trichoderma virens	43.75	1.00e-99	356.00
IUUC-Tae-123191	Triticum aestivum	76.09	0.00e+00	757.00
IUUC-Tme-127077	Tuber melanosporum	50.00	1.00e-107	382.00
IUUC-Tbe-127744	Tupaia belangeri	38.10	6.00e-69	255.00
IUUC-Ttr-128777	Tursiops truncatus	43.24	6.00e-106	378.00
IUUC-Uma-129568	Ustilago maydis	42.36	5.00e-93	334.00
IUUC-Vda-129834	Verticillium dahliae	42.08	2.00e-93	335.00
IUUC-Vpa-130563	Vicugna pacos	53.54	8.00e-30	125.00
IUUC-Vvi-131360	Vitis vinifera	91.16	0.00e+00	918.00
IUUC-Xtr-132630	Xenopus tropicalis	51.75	3.00e-136	479.00
IUUC-Xma-133665	Xiphophorus maculatus	51.52	7.00e-134	471.00
IUUC-Yli-134556	Yarrowia lipolytica	38.26	7.00e-82	296.00
IUUC-Zma-135787	Zea mays	80.31	0.00e+00	780.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence