iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005951

Ensembl Protein ID

fgenesh2_kg.6__455__AT5G05282.1

UniProt Accession

D7LYC6; D7LYC6_ARALL

Genbank Protein ID

EFH49462.1

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348718

Gene Name

ARALYDRAFT_487321

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.6__455__AT5G05282.1	fgenesh2_kg.6__455__AT5G05282.1	fgenesh2_kg.6__455__AT5G05282.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.10e-08	34.7	115	157

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl df   ++ ++vlp C+H fh +C+  w         + +CP+Cr
   Q: 115  CLICLGDFvegET-VRVLPkCNHGFHVKCIDTW------LLSHSSCPTCR 157
           ********77444.*******************......888999****8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MARFLLETQA TPTISATDAN PRTLGDSVSN KKNIASMDTH MVIVLAALLC ALICALGINS 60
VLRCVLRCTR RFTPDEDPVD TNANVNVAKG IKKRALKLIP VDSYSLELKM KATECLICLG 120

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Nucleotide Sequence
(Fasta)

ATTTCCTACT CTTATAGAAC AACTTATTTC CTTTTGTGTA AAACTCAAAT AAGAACTTGT 60
ATAAAGAAAC AGATCATTAA GGATTTGAGA TTTGATATCT CCATGGATTT ATCAAGTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0009901--P:anther dehiscence
GO:0009555--P:pollen development
GO:0080141--P:regulation of jasmonic acid biosynthetic process

KEGG

aly:ARALYDRAFT_487321

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000811	Aegilops tauschii	48.39	1.00e-18	85.10
IUUC-Ath-006766	Arabidopsis thaliana	95.51	2.00e-88	317.00
IUUC-Bol-015607	Brassica oleracea	77.71	2.00e-67	246.00
IUUC-Dme-032121	Drosophila melanogaster	43.84	6.00e-12	62.40
IUUC-Gma-043926	Glycine max	68.94	4.00e-39	153.00
IUUC-Mtr-058744	Medicago truncatula	53.67	3.00e-35	140.00
IUUC-Opu-084071	Oryza punctata	45.97	6.00e-28	116.00
IUUC-Ppa-095980	Physcomitrella patens	44.53	1.00e-22	98.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence