iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058200

Ensembl Protein ID

KEH24904

UniProt Accession

A0A072U5A3; A0A072U5A3_MEDTR

Genbank Protein ID

KEH24904.1

Protein Name

Transducin/WD-like repeat-protein

Genbank Nucleotide ID

CM001222

Gene Name

MTR_6g007797

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_6g007797	KEH24904	KEH24904

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.00e-16	59.6	114	147

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           gH+ +v +l+    + + + sGs D+++++WDlr 
   Q: 114  GHKQRVVSLCMspiN-DSFMSGSVDHSVRLWDLRV 147
           899******998765.789*************985 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MTASLTELDD DIVRTMSIGA VFSDYVGKIY SIDFHRKDDL LVTAGEDDSV RLYDIVNAKL 60
LKTTYHKKHG TDQICFTHHP SSVICSSRYN LESTGESLRY LSMYDNRCLR YFKGHKQRVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCAGCCCAAT AATCAATCAC ACAACAAAGG AATCCCATTC ATCGCTCTCT CCTCTCTGCT 60
CCATCTTCAT CTAATCATCT CTCTCCGTCG ACGGCGTTGC TCTGTTCCCG ACCACCACTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0016571--P:histone methylation
GO:0048586--P:regulation of long-day photoperiodism, flowering
GO:0048510--P:regulation of timing of transition from vegetative to reproductive phase

KEGG

mtr:MTR_6g007797

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001012	Aegilops tauschii	77.43	3.00e-120	423.00
IUUC-Atr-002592	Amborella trichopoda	82.14	3.00e-139	486.00
IUUC-Aly-005437	Arabidopsis lyrata	82.80	9.00e-160	555.00
IUUC-Ath-006793	Arabidopsis thaliana	83.12	6.00e-160	555.00
IUUC-Bgr-012008	Blumeria graminis	32.43	7.00e-41	160.00
IUUC-Bci-013966	Botrytis cinerea	31.93	8.00e-41	160.00
IUUC-Bdi-015066	Brachypodium distachyon	78.48	2.00e-154	537.00
IUUC-Bol-016019	Brassica oleracea	79.34	2.00e-159	554.00
IUUC-Bra-017871	Brassica rapa	82.80	1.00e-159	554.00
IUUC-Cpo-022227	Cavia porcellus	36.42	4.00e-53	201.00
IUUC-Cin-025628	Ciona intestinalis	41.38	2.00e-68	251.00
IUUC-Csv-026164	Ciona savignyi	40.25	2.00e-69	254.00
IUUC-Cne-026890	Cryptococcus neoformans	29.83	4.00e-29	121.00
IUUC-Cme-027288	Cyanidioschyzon merolae	33.14	2.00e-50	191.00
IUUC-Dor-031078	Dipodomys ordii	42.00	5.00e-45	173.00
IUUC-Dse-031152	Dothistroma septosporum	31.34	5.00e-40	157.00
IUUC-Dme-032085	Drosophila melanogaster	40.31	6.00e-71	260.00
IUUC-Fox-037858	Fusarium oxysporum	32.73	4.00e-42	164.00
IUUC-Fso-038386	Fusarium solani	31.91	1.00e-36	146.00
IUUC-Gmo-038506	Gadus morhua	40.79	4.00e-63	235.00
IUUC-Ggr-040090	Gaeumannomyces graminis	32.10	2.00e-41	162.00
IUUC-Gac-041551	Gasterosteus aculeatus	38.85	8.00e-64	236.00
IUUC-Gma-044074	Glycine max	88.02	4.00e-180	622.00
IUUC-Hvu-047731	Hordeum vulgare	80.30	3.00e-130	457.00
IUUC-Lpe-050830	Leersia perrieri	79.49	2.00e-155	540.00
IUUC-Meu-056113	Macropus eugenii	33.01	1.00e-44	172.00
IUUC-Mor-057267	Magnaporthe oryzae	32.10	6.00e-38	150.00
IUUC-Mpo-057502	Magnaporthe poae	32.41	7.00e-42	164.00
IUUC-Mla-058815	Melampsora laricipopulina	34.44	2.00e-51	195.00
IUUC-Mac-065314	Musa acuminata	81.56	6.00e-164	568.00
IUUC-Ncr-068702	Neurospora crassa	29.47	2.00e-32	132.00
IUUC-Oba-075394	Oryza barthii	67.62	3.00e-110	390.00
IUUC-Obr-076456	Oryza brachyantha	79.75	2.00e-157	547.00
IUUC-Ogl-076973	Oryza glaberrima	80.13	6.00e-158	549.00
IUUC-Ogu-078296	Oryza glumaepatula	67.26	7.00e-110	389.00
IUUC-Oin-079656	Oryza indica	79.81	1.00e-157	548.00
IUUC-Olo-080893	Oryza longistaminata	68.14	3.00e-128	450.00
IUUC-Ome-081559	Oryza meridionalis	73.78	1.00e-71	261.00
IUUC-Oni-083104	Oryza nivara	67.26	7.00e-110	389.00
IUUC-Opu-084098	Oryza punctata	65.30	3.00e-120	423.00
IUUC-Oru-084364	Oryza rufipogon	67.26	3.00e-110	390.00
IUUC-Osa-086296	Oryza sativa	79.81	1.00e-157	548.00
IUUC-Olu-087603	Ostreococcus lucimarinus	36.50	4.00e-54	204.00
IUUC-Ppa-095292	Physcomitrella patens	67.85	1.00e-127	448.00
IUUC-Pop-099608	Populus trichocarpa	82.63	1.00e-168	584.00
IUUC-Pca-100635	Procavia capensis	41.25	9.00e-59	219.00
IUUC-Ppe-101452	Prunus persica	80.18	7.00e-169	585.00
IUUC-Pgr-103395	Puccinia graminis	36.52	8.00e-56	210.00
IUUC-Ptt-103747	Puccinia triticina	38.25	9.00e-55	207.00
IUUC-Sce-106257	Saccharomyces cerevisiae	30.49	2.00e-36	145.00
IUUC-Sha-107529	Sarcophilus harrisii	37.90	6.00e-62	230.00
IUUC-Sja-107724	Schizosaccharomyces japonicus	31.90	2.00e-37	148.00
IUUC-Spo-108206	Schizosaccharomyces pombe	36.40	4.00e-40	157.00
IUUC-Smo-109591	Selaginella moellendorffii	66.88	2.00e-126	444.00
IUUC-Sit-109858	Setaria italica	79.68	3.00e-156	543.00
IUUC-Sly-111267	Solanum lycopersicum	73.00	3.00e-151	526.00
IUUC-Sbi-114232	Sorghum bicolor	82.63	6.00e-119	419.00
IUUC-Sre-115157	Sporisorium reilianum	31.41	3.00e-39	155.00
IUUC-Tru-117604	Takifugu rubripes	40.38	6.00e-66	244.00
IUUC-Tni-120237	Tetraodon nigroviridis	40.06	7.00e-66	244.00
IUUC-Tca-121853	Theobroma cacao	82.20	3.00e-170	590.00
IUUC-Tre-122205	Trichoderma reesei	31.34	1.00e-39	156.00
IUUC-Tvi-122471	Trichoderma virens	28.14	2.00e-29	122.00
IUUC-Tae-125200	Triticum aestivum	78.80	2.00e-156	544.00
IUUC-Tme-126883	Tuber melanosporum	36.64	2.00e-45	175.00
IUUC-Uma-129579	Ustilago maydis	34.48	2.00e-46	179.00
IUUC-Vda-129826	Verticillium dahliae	32.05	6.00e-39	154.00
IUUC-Vvi-131587	Vitis vinifera	84.57	5.00e-172	595.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence