iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oba-075394

Ensembl Protein ID

OBART05G24520.1

UniProt Accession

A0A0D3GAD1; A0A0D3GAD1_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OBART05G24520	OBART05G24520.1	OBART05G24520.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-18	66.7	113	146

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           gH+d+v +l+    + + + sGs D+++++WDlr 
   Q: 113  GHKDRVVSLCMspvN-DSFMSGSLDHSVRIWDLRV 146
           8**********9633.89**************985 PP

Organism

Oryza barthii

Protein Sequence
(Fasta)

MAATLSQLDD GIVRGMAIGA VFTDYAGKIN CLDFHRKEDL LVTSSEDDSI RLYNITSATL 60
LKTTYHRKHG ADRVCFTHHP SSILCSSRYN LESAESLRYL SLYDNRCLRY FKGHKDRVVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGCACGAAG CTACCTCACG TTCCCAGATC AACGGCGTGG ATTGCGCCAC CGGAGCCCGC 60
ATCCGCATCC ACCACCTCCG CTCGCAATCA CTCTACAACA GATCGGAAAC CTCGCGGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR003143--Cyt_cd1_C
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0016571--P:histone methylation
GO:0048586--P:regulation of long-day photoperiodism, flowering
GO:0048510--P:regulation of timing of transition from vegetative to reproductive phase

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001012	Aegilops tauschii	82.04	1.00e-98	351.00
IUUC-Atr-002592	Amborella trichopoda	68.93	2.00e-107	381.00
IUUC-Aly-005437	Arabidopsis lyrata	67.27	2.00e-106	378.00
IUUC-Ath-006793	Arabidopsis thaliana	67.27	1.00e-106	378.00
IUUC-Bdi-015066	Brachypodium distachyon	82.14	3.00e-133	466.00
IUUC-Bol-016019	Brassica oleracea	67.27	4.00e-106	377.00
IUUC-Bra-017871	Brassica rapa	67.27	3.00e-106	377.00
IUUC-Gma-044074	Glycine max	66.55	2.00e-109	388.00
IUUC-Hvu-047731	Hordeum vulgare	79.09	4.00e-118	416.00
IUUC-Lpe-050830	Leersia perrieri	82.61	5.00e-131	459.00
IUUC-Mtr-058200	Medicago truncatula	67.62	5.00e-110	390.00
IUUC-Mac-065314	Musa acuminata	70.61	5.00e-115	406.00
IUUC-Obr-076456	Oryza brachyantha	83.93	5.00e-135	473.00
IUUC-Ogl-076973	Oryza glaberrima	85.71	2.00e-137	481.00
IUUC-Ogu-078296	Oryza glumaepatula	99.60	2.00e-147	513.00
IUUC-Oin-079656	Oryza indica	85.36	3.00e-137	480.00
IUUC-Olo-080893	Oryza longistaminata	98.76	9.00e-142	495.00
IUUC-Ome-081559	Oryza meridionalis	80.24	2.00e-111	393.00
IUUC-Oni-083104	Oryza nivara	99.60	2.00e-147	513.00
IUUC-Opu-084098	Oryza punctata	94.19	3.00e-132	463.00
IUUC-Oru-084364	Oryza rufipogon	99.60	4.00e-148	516.00
IUUC-Osa-086296	Oryza sativa	85.36	3.00e-137	480.00
IUUC-Pop-099608	Populus trichocarpa	69.86	8.00e-114	402.00
IUUC-Ppe-101452	Prunus persica	68.33	1.00e-112	398.00
IUUC-Sja-107724	Schizosaccharomyces japonicus	30.99	6.00e-27	114.00
IUUC-Sit-109858	Setaria italica	83.15	3.00e-133	467.00
IUUC-Sly-111267	Solanum lycopersicum	65.11	3.00e-103	367.00
IUUC-Sbi-114232	Sorghum bicolor	81.28	1.00e-106	378.00
IUUC-Tca-121853	Theobroma cacao	70.50	2.00e-113	401.00
IUUC-Tae-124944	Triticum aestivum	80.36	5.00e-130	456.00
IUUC-Vvi-131587	Vitis vinifera	68.71	2.00e-111	394.00
IUUC-Zma-134685	Zea mays	82.86	6.00e-134	469.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence