iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-116386

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU915558

Gene Name

WDR82

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000011433.2	ENSSSCT00000012513.2	ENSSSCP00000012185.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-24	85.3	105	141
UBD/Beta-Prp	2.50e-40	138.8	16	307

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvl 35
           gH+ +v +l+    d++++sGs D+ti++WDlr+ ++
   Q: 105  GHSKRVVALSMspVDDTFISGSLDKTIRLWDLRSPNC 141
           799999999999755899**************99876 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgse..Drtikvwdlstgkcvhtlk 91
           ++ ++++ i+c +fsp+++ ++++s+d++i ++d ++gk  r+l++++ +v  +++ + +++ v +s+  D+ti+  +l ++k+++ + 
   Q: 16   VFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNkiDDTIRYLSLHDNKYIRYFP 104
           56678899*****************************************************9999998668****************** PP
   S: 92   ghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl....ktgkllrtlt 176
           gh+++v++ls+sp +d+++sGs d+tir+wdl++  c       h +   + +++p+g ++++G + ++v+l+dl    k  +   +++
   Q: 105  GHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQG---LMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLrsfdKGPFATFKMQ 190
           **************************************8...4455555677899*9******************66554455555558 PP
   S: 177  gghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght...dnvksvrfspnderlvsgssDgsiriWdlrsgdllktlql 262
            + t   + l+f+ +gk ++   + + ++l d  +g +++t+ g+    + ++   f+p++++++ gs+Dg i +W+ +sg  + +l +
   Q: 191  YDRTCEWTGLKFSNDGKLILISTNGSFIRLIDAFKGVVMHTFGGYAnskAVTLEASFTPDSQFIMIGSEDGKIHVWNGESGIKVAVLDG 279
           88889999999******************************99977333556677899******************************* PP
   S: 263  hnssvisvavlsfgdnvlvlgsedskvniw 292
           ++    ++++l+f+ + +  +s+ s+  +w
   Q: 280  KH--TGPITCLQFNPKFMTFASACSNMAFW 307
           66..88999999998888888877666665 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MKLTDSVLRS FRVAKVFREN SDKINCFDFS PNGETVISSS DDDSIVLYDC QEGKPKRTLY 60
SKKYGVDLIR YTHAANTVVY SSNKIDDTIR YLSLHDNKYI RYFPGHSKRV VALSMSPVDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCACCCAGC CACACCACTC TCTCTGCCGG CCGCGCTGAC GTCACCGCCT CGCCTCGCGC 60
CGCCGTTCTC GCCCCGCCCC CTTTCCCGTC TTGCGCCGCG GTGAGGCTCC TCGCCCTCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000785--C:chromatin
GO:0000784--C:nuclear chromosome, telomeric region
GO:0005730--C:nucleolus
GO:0072357--C:PTW/PP1 phosphatase complex
GO:0048188--C:Set1C/COMPASS complex
GO:0003682--F:chromatin binding
GO:0042800--F:histone methyltransferase activity (H3-K4 specific)
GO:0080182--P:histone H3-K4 trimethylation

KEGG

ssc:100522703

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000390	Aegilops tauschii	39.62	1.00e-62	233.00
IUUC-Aml-001221	Ailuropoda melanoleuca	100.00	0.00e+00	636.00
IUUC-Atr-002607	Amborella trichopoda	40.38	8.00e-71	259.00
IUUC-Apl-003817	Anas platyrhynchos	97.70	2.00e-175	608.00
IUUC-Aca-005383	Anolis carolinensis	94.89	5.00e-176	609.00
IUUC-Aly-005437	Arabidopsis lyrata	39.42	6.00e-69	253.00
IUUC-Ath-006793	Arabidopsis thaliana	39.42	1.00e-68	253.00
IUUC-Ago-007804	Ashbya gossypii	33.97	2.00e-49	189.00
IUUC-Acl-008217	Aspergillus clavatus	36.66	5.00e-55	207.00
IUUC-Afl-008539	Aspergillus flavus	35.67	4.00e-56	211.00
IUUC-Afu-009105	Aspergillus fumigatus	36.66	4.00e-56	211.00
IUUC-Ani-009474	Aspergillus nidulans	35.93	3.00e-53	201.00
IUUC-Ang-009858	Aspergillus niger	37.13	2.00e-57	215.00
IUUC-Aor-009955	Aspergillus oryzae	35.67	4.00e-56	211.00
IUUC-Ate-010364	Aspergillus terreus	36.95	2.00e-57	215.00
IUUC-Ame-010661	Astyanax mexicanus	92.43	5.00e-169	587.00
IUUC-Bgr-012008	Blumeria graminis	35.84	6.00e-57	214.00
IUUC-Bta-013022	Bos taurus	100.00	3.00e-178	617.00
IUUC-Bci-013966	Botrytis cinerea	35.58	6.00e-51	194.00
IUUC-Bdi-015066	Brachypodium distachyon	41.48	9.00e-73	266.00
IUUC-Bol-016019	Brassica oleracea	40.06	2.00e-69	255.00
IUUC-Bra-017871	Brassica rapa	40.06	3.00e-69	254.00
IUUC-Cel-018276	Caenorhabditis elegans	43.09	2.00e-73	268.00
IUUC-Cja-019309	Callithrix jacchus	100.00	0.00e+00	636.00
IUUC-Cfa-020345	Canis familiaris	100.00	0.00e+00	636.00
IUUC-Cpo-022227	Cavia porcellus	92.38	9.00e-165	572.00
IUUC-Csa-023267	Chlorocebus sabaeus	94.25	4.00e-178	616.00
IUUC-Cho-024409	Choloepus hoffmanni	89.83	3.00e-146	510.00
IUUC-Cin-025628	Ciona intestinalis	70.16	4.00e-138	483.00
IUUC-Csv-026164	Ciona savignyi	70.06	6.00e-138	483.00
IUUC-Cgl-026516	Colletotrichum gloeosporioides	35.13	5.00e-52	197.00
IUUC-Cne-026890	Cryptococcus neoformans	28.39	2.00e-35	142.00
IUUC-Cme-027288	Cyanidioschyzon merolae	37.91	2.00e-65	242.00
IUUC-Dre-028001	Danio rerio	93.61	6.00e-175	605.00
IUUC-Dno-029056	Dasypus novemcinctus	100.00	0.00e+00	636.00
IUUC-Dor-031078	Dipodomys ordii	100.00	2.00e-121	427.00
IUUC-Dse-031152	Dothistroma septosporum	36.93	7.00e-58	217.00
IUUC-Dme-032085	Drosophila melanogaster	69.01	6.00e-140	489.00
IUUC-Ete-033158	Echinops telfairi	96.17	2.00e-178	617.00
IUUC-Eca-033879	Equus caballus	99.60	8.00e-151	526.00
IUUC-Eeu-035229	Erinaceus europaeus	88.82	3.00e-153	533.00
IUUC-Fca-035896	Felis catus	100.00	0.00e+00	636.00
IUUC-Fal-036843	Ficedula albicollis	97.70	2.00e-175	608.00
IUUC-Fox-037858	Fusarium oxysporum	36.81	5.00e-57	214.00
IUUC-Fso-038386	Fusarium solani	35.57	2.00e-48	186.00
IUUC-Gmo-038506	Gadus morhua	92.13	1.00e-167	582.00
IUUC-Ggr-040090	Gaeumannomyces graminis	37.87	4.00e-57	214.00
IUUC-Gga-040192	Gallus gallus	97.76	1.00e-180	625.00
IUUC-Gac-042494	Gasterosteus aculeatus	90.52	7.00e-164	570.00
IUUC-Gma-042835	Glycine max	41.72	6.00e-70	257.00
IUUC-Ggo-045204	Gorilla gorilla	100.00	6.00e-179	620.00
IUUC-Hsa-045866	Homo sapiens	100.00	0.00e+00	636.00
IUUC-Hvu-047690	Hordeum vulgare	39.30	6.00e-62	230.00
IUUC-Itr-048338	Ictidomys tridecemlineatus	100.00	0.00e+00	636.00
IUUC-Kpa-049249	Komagataella pastoris	36.53	5.00e-57	214.00
IUUC-Lch-050431	Latimeria chalumnae	94.81	1.00e-173	602.00
IUUC-Lpe-050830	Leersia perrieri	41.48	3.00e-72	265.00
IUUC-Loc-052505	Lepisosteus oculatus	96.59	2.00e-41	160.00
IUUC-Lma-053026	Leptosphaeria maculans	35.82	2.00e-59	222.00
IUUC-Laf-054265	Loxodonta africana	78.43	2.00e-130	457.00
IUUC-Mcc-055583	Macaca mulatta	100.00	0.00e+00	636.00
IUUC-Meu-056113	Macropus eugenii	85.30	2.00e-149	521.00
IUUC-Mor-057267	Magnaporthe oryzae	35.07	2.00e-50	192.00
IUUC-Mpo-057502	Magnaporthe poae	37.57	9.00e-56	210.00
IUUC-Mtr-058607	Medicago truncatula	41.40	9.00e-70	256.00
IUUC-Mla-058815	Melampsora laricipopulina	39.11	4.00e-70	258.00
IUUC-Mga-059407	Meleagris gallopavo	97.31	2.00e-153	533.00
IUUC-Mvi-060411	Microbotryum violaceum	37.02	2.00e-63	236.00
IUUC-Mmr-061470	Microcebus murinus	100.00	0.00e+00	636.00
IUUC-Mdo-062860	Monodelphis domestica	97.76	3.00e-180	623.00
IUUC-Mmu-063105	Mus musculus	100.00	0.00e+00	636.00
IUUC-Mac-065314	Musa acuminata	41.03	3.00e-70	258.00
IUUC-Mpu-066472	Mustela putorius furo	100.00	8.00e-156	541.00
IUUC-Mlu-067073	Myotis lucifugus	100.00	2.00e-180	624.00
IUUC-Nfi-068284	Neosartorya fischeri	36.66	3.00e-56	211.00
IUUC-Ncr-068702	Neurospora crassa	34.20	6.00e-46	177.00
IUUC-Nle-069451	Nomascus leucogenys	100.00	0.00e+00	636.00
IUUC-Opr-071112	Ochotona princeps	100.00	8.00e-156	541.00
IUUC-Ont-071988	Oreochromis niloticus	91.78	9.00e-168	583.00
IUUC-Oan-072947	Ornithorhynchus anatinus	97.68	4.00e-153	533.00
IUUC-Ocu-074969	Oryctolagus cuniculus	100.00	0.00e+00	636.00
IUUC-Oba-075229	Oryza barthii	37.70	9.00e-57	214.00
IUUC-Obr-076456	Oryza brachyantha	41.80	1.00e-72	266.00
IUUC-Ogl-076973	Oryza glaberrima	41.80	5.00e-73	267.00
IUUC-Ogu-078068	Oryza glumaepatula	37.38	6.00e-57	214.00
IUUC-Oin-079656	Oryza indica	41.80	7.00e-73	266.00
IUUC-Olo-080893	Oryza longistaminata	36.33	9.00e-54	203.00
IUUC-Ome-081559	Oryza meridionalis	36.65	5.00e-34	136.00
IUUC-Oni-082990	Oryza nivara	37.38	2.00e-56	213.00
IUUC-Opu-083374	Oryza punctata	38.02	6.00e-57	213.00
IUUC-Oru-084354	Oryza rufipogon	37.38	2.00e-56	213.00
IUUC-Osa-086296	Oryza sativa	41.80	7.00e-73	266.00
IUUC-Ola-087095	Oryzias latipes	92.33	1.00e-173	601.00
IUUC-Olu-087603	Ostreococcus lucimarinus	36.39	9.00e-56	210.00
IUUC-Oga-088766	Otolemur garnettii	100.00	0.00e+00	636.00
IUUC-Oar-089565	Ovis aries	97.76	5.00e-179	619.00
IUUC-Ptr-091219	Pan troglodytes	92.33	1.00e-174	604.00
IUUC-Pan-091733	Papio anubis	100.00	0.00e+00	636.00
IUUC-Psi-092972	Pelodiscus sinensis	97.38	2.00e-174	605.00
IUUC-Pma-094332	Petromyzon marinus	86.58	4.00e-169	586.00
IUUC-Pno-094960	Phaeosphaeria nodorum	38.89	1.00e-61	229.00
IUUC-Ppa-095292	Physcomitrella patens	45.19	7.00e-82	296.00
IUUC-Pfo-096775	Poecilia formosa	91.45	5.00e-167	580.00
IUUC-Pab-097721	Pongo abelii	97.76	2.00e-176	610.00
IUUC-Pop-098907	Populus trichocarpa	41.35	3.00e-70	258.00
IUUC-Pca-100635	Procavia capensis	98.84	2.00e-151	527.00
IUUC-Ppe-101860	Prunus persica	41.35	5.00e-71	260.00
IUUC-Pva-102798	Pteropus vampyrus	99.36	0.00e+00	632.00
IUUC-Pgr-103395	Puccinia graminis	38.76	6.00e-71	260.00
IUUC-Ptt-103747	Puccinia triticina	37.39	3.00e-67	248.00
IUUC-Pte-104129	Pyrenophora teres	38.00	4.00e-56	213.00
IUUC-Pyt-104773	Pyrenophora triticirepentis	35.14	2.00e-58	219.00
IUUC-Rno-106127	Rattus norvegicus	97.13	1.00e-175	608.00
IUUC-Sce-106257	Saccharomyces cerevisiae	33.75	5.00e-45	174.00
IUUC-Sha-106573	Sarcophilus harrisii	86.82	3.00e-160	557.00
IUUC-Sja-107724	Schizosaccharomyces japonicus	35.98	3.00e-47	181.00
IUUC-Spo-108206	Schizosaccharomyces pombe	34.65	2.00e-50	192.00
IUUC-Smo-108979	Selaginella moellendorffii	44.55	2.00e-80	291.00
IUUC-Sit-109858	Setaria italica	41.67	3.00e-72	265.00
IUUC-Sly-111267	Solanum lycopersicum	42.31	2.00e-71	262.00
IUUC-Sar-113079	Sorex araneus	100.00	8.00e-156	541.00
IUUC-Sbi-114094	Sorghum bicolor	37.70	8.00e-60	223.00
IUUC-Sre-115157	Sporisorium reilianum	34.46	3.00e-54	205.00
IUUC-Tgu-116465	Taeniopygia guttata	93.89	5.00e-147	514.00
IUUC-Tru-117604	Takifugu rubripes	91.45	2.00e-167	582.00
IUUC-Tsy-119314	Tarsius syrichta	76.80	7.00e-108	382.00
IUUC-Tni-120237	Tetraodon nigroviridis	91.12	2.00e-165	575.00
IUUC-Tca-121853	Theobroma cacao	41.35	2.00e-70	258.00
IUUC-Tre-122205	Trichoderma reesei	35.34	5.00e-54	204.00
IUUC-Tvi-122471	Trichoderma virens	31.61	8.00e-41	160.00
IUUC-Tae-124944	Triticum aestivum	41.80	5.00e-74	270.00
IUUC-Tur-126512	Triticum urartu	42.55	2.00e-59	222.00
IUUC-Tme-126883	Tuber melanosporum	40.37	3.00e-61	228.00
IUUC-Tbe-127310	Tupaia belangeri	93.18	1.00e-70	259.00
IUUC-Ttr-128307	Tursiops truncatus	100.00	8.00e-156	541.00
IUUC-Uma-129579	Ustilago maydis	34.59	1.00e-53	202.00
IUUC-Vda-129826	Verticillium dahliae	34.97	1.00e-51	196.00
IUUC-Vpa-130091	Vicugna pacos	100.00	8.00e-156	541.00
IUUC-Vvi-131040	Vitis vinifera	41.67	7.00e-71	261.00
IUUC-Xtr-132660	Xenopus tropicalis	94.52	2.00e-172	598.00
IUUC-Xma-133496	Xiphophorus maculatus	91.69	8.00e-173	598.00
IUUC-Yli-134509	Yarrowia lipolytica	38.32	3.00e-62	231.00
IUUC-Zma-134685	Zea mays	41.48	3.00e-72	264.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence