iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000672

Ensembl Protein ID

EMT25685

UniProt Accession

M8BL34; M8BL34_AEGTA

Genbank Protein ID

EMT25685.1

Protein Name

RING-H2 finger protein ATL3F

Genbank Nucleotide ID

KD514825

Gene Name

F775_03528

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_03528	EMT25685	EMT25685

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.50e-06	27.6	118	160

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C  + + g   ++lp CgH fha C+ +w         + +CPlCr
   Q: 118  CAVCIVESRGGalARLLPrCGHRFHAACVDAW------LHLHSTCPLCR 160
           9999887744444556777*************......999*******8 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MSTPQSGGPS PATTAAAAET SKHWAPHGPM LTACLVSINV LMILLVFFYF WRFFSGKREP 60
SSPGGADEEA SSTDSSPATS PRASRRLRDP DQPDIPSSLP VSVFDSSSEA AGKAAADCAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCAACGC CCCAGAGCGG CGGCCCGAGC CCAGCGACCA CGGCGGCAGC GGCGGAGACG 60
AGCAAACACT GGGCGCCGCA TGGCCCGATG CTGACTGCCT GCCTCGTCAG CATCAACGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0472--Membrane
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

ats:F775_03528

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014463	Brachypodium distachyon	64.02	1.00e-40	158.00
IUUC-Lpe-051387	Leersia perrieri	57.39	2.00e-39	154.00
IUUC-Ome-081098	Oryza meridionalis	48.70	3.00e-17	82.40
IUUC-Oni-082563	Oryza nivara	53.69	3.00e-41	160.00
IUUC-Opu-083632	Oryza punctata	50.00	1.00e-37	150.00
IUUC-Osa-085994	Oryza sativa	55.29	1.00e-40	158.00
IUUC-Tae-125933	Triticum aestivum	98.39	4.00e-59	219.00
IUUC-Tur-126341	Triticum urartu	95.73	8.00e-57	212.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence