iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000690

Ensembl Protein ID

EMT25858

UniProt Accession

M8BVM1; M8BVM1_AEGTA

Genbank Protein ID

EMT25858.1

Protein Name

RING-H2 finger protein ATL4O

Genbank Nucleotide ID

KD514413

Gene Name

F775_02933

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_02933	EMT25858	EMT25858

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.50e-07	30.2	161	203

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl + ++g   + lp C H+fh++C+  w         + +CP+Cr
   Q: 161  CAVCLGEVEKGdtMKRLPaCLHMFHQQCIDPW------LHEHSTCPVCR 203
           ********66544666779*************......99********8 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MAVDCFHRAY ALAIVNAVCI GGTAMILYAL VNLARKPDHS RGSIIVLTVF LLFWVGVGAS 60
VYTAFCGVLF PWSALRRCLA STSGALMYYF RRTGWLHCLP GRSRLRRRSG SSALPQFLDQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGTGG ATTGCTTCCA CCGCGCGTAT GCGCTGGCCA TCGTCAACGC CGTCTGCATC 60
GGCGGCACGG CCATGATCCT CTACGCGCTC GTCAACCTGG CGCGGAAGCC CGACCACAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0472--Membrane
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

ats:F775_02933

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014998	Brachypodium distachyon	48.42	2.00e-41	161.00
IUUC-Hvu-047554	Hordeum vulgare	80.49	7.00e-34	134.00
IUUC-Lpe-051703	Leersia perrieri	51.39	2.00e-44	171.00
IUUC-Oba-075385	Oryza barthii	48.85	3.00e-39	156.00
IUUC-Obr-076502	Oryza brachyantha	35.21	1.00e-20	92.00
IUUC-Ogl-077105	Oryza glaberrima	47.49	2.00e-40	158.00
IUUC-Ogu-078905	Oryza glumaepatula	48.86	8.00e-41	163.00
IUUC-Oin-079048	Oryza indica	48.42	6.00e-42	162.00
IUUC-Ome-081624	Oryza meridionalis	49.49	4.00e-36	144.00
IUUC-Oni-082150	Oryza nivara	48.86	6.00e-40	158.00
IUUC-Opu-083847	Oryza punctata	50.00	8.00e-46	175.00
IUUC-Oru-084520	Oryza rufipogon	49.30	9.00e-44	172.00
IUUC-Osa-085933	Oryza sativa	44.80	4.00e-37	147.00
IUUC-Sit-109689	Setaria italica	52.23	1.00e-53	201.00
IUUC-Sbi-114674	Sorghum bicolor	48.76	1.00e-50	191.00
IUUC-Tae-124225	Triticum aestivum	100.00	2.00e-117	413.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence