iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017658

Ensembl Protein ID

Bra000874.1-P

UniProt Accession

M4C9J5; M4C9J5_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra000874	Bra000874.1	Bra000874.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/Cullin	2.60e-150	503.1	33	641

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/Cullin

   S: 13   esvkkeyeelytavynlclsk....vgaklYkklkevleefi.kqvkkkveesedeqlLktynreWekfreqlkvlrkifayldrtyvkkskkvse 103
           +   ++y+ lyt +yn+c++k    ++++lY+k +e+ ee+i   v    +e++de +L+ +++ W +++  +  l + f yldr+++ + +++ +
   Q: 33   QFDSEQYMMLYTTIYNMCTQKpphdYSQQLYDKYREAFEEYInSTVLPALKEKHDEYMLRELVKRWSNHKVMVRWLSRFFYYLDRYFIAR-RSLPP 127
           444789***************9*99*****************88999*******************************************.9**** PP
   S: 104  vrkLaldlwrkeivedikkrllelllklieaeRkgeavdrrllsgvveslveLslnklaiykesFEakfleatqefykaesaeflqenevdeYlkk 199
            ++++l  +r+ + +++++++ ++++ l+ +eR+ge++dr ll++v   +ve+++ + + y+ +FE+  l  ++ +y++++++ +qe ++ +Y+ k
   Q: 128  LNEVGLTCFRDRVYNELHSKVKDAVIALVDKEREGEQIDRALLKNVLDIYVEIGMGQMERYEVDFESFMLLDSASYYSRKASSWIQEDSCPDYMLK 223
           ************************************************************************************************ PP
   S: 200  vearlneeeeraaryleestetkLlevvekeliakhlesll....aelvallrdkktedlsrmykLlsrvlngleellkeleshikeqgkaaltae 291
            e+ l++e er+a+yl++s+e kL+e+v++el++ ++++ll    +++ allrd+k +dlsrmy+L +++ +gle++++ +++h+  +g+a+++++
   Q: 224  SEECLKKERERVAHYLHSSSEPKLVEKVQHELLVVYANQLLekehSGCRALLRDDKVDDLSRMYRLYHKIAKGLEPVANIFKQHVTAEGNALVQQA 319
           ****************************************999999************************************************54 PP
   S: 292  ekek..........dpkkyVerllelknklqklvseaFnndakFlkaldkafetfvnknsvlkaakspEllAryiDqlLrks.skglteeeleaql 376
           e +           + +  +++++el++k+   v e+F+n + F kal++afe f nk+  +  + s+EllA ++D+ L+k+ s +l +e +e++l
   Q: 320  EDTAtnqaantasvQEQVLIRKVIELHDKYMVYVVECFQNHTLFHKALKEAFEIFCNKT--VAGSSSAELLATFCDNILKKGgSEKLSDEAIEDTL 413
           444445788888886689*****************************************..7779999**************************** PP
   S: 377  dkvllvfkyisekdvFekyYkkhLakRLlsgksasseaEesviekLkeecgaeftskLerMfqdlkvSedlnrqFkeek.enteesesvelsvlvL 471
           +kv+ ++ yis+kd+F ++Y+k La+RLl + sa ++ E+s+++kLk++cg +ftsk+e+M++dl + ++ ++ F+e   +n  ++++++l+v vL
   Q: 414  EKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLgNNPAANPGIDLTVTVL 509
           ****************************************************************************9862566788********** PP
   S: 472  sagaWptasetekvsLPaelektiekfeefYlekhsgRkLqWqhtlgraelkaelkkgkyelqVstfQmavLLafnnsekvsveelkkatelpeee 567
           ++g+Wp + +   ++LP+e+ k +e f+ fY+ k ++RkL+W ++lg+++l+ ++++++ el Vst+Q+avLL+fn+++k+s++++  + +l++e+
   Q: 510  TTGFWPSYKSFD-INLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGTCHLNGKFDHKPIELVVSTYQAAVLLLFNTTDKLSYNDILTQLNLSHED 604
           ********7755.*********************************************************************************** PP
   S: 568  LrrtlqsLvsskkqvlkkepeskeieeedlfsvNqef 604
           L r l sL + + ++l kep +k ++++d+f +N +f
   Q: 605  LVRLLHSLSCARYKILVKEPSTKIVSQTDSFEFNAKF 641
           **********************************998 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MERKTIDLEQ GWDYMQTGIT KLKRILEGLP EPQFDSEQYM MLYTTIYNMC TQKPPHDYSQ 60
QLYDKYREAF EEYINSTVLP ALKEKHDEYM LRELVKRWSN HKVMVRWLSR FFYYLDRYFI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGCGGA AGACGATTGA TTTGGAGCAA GGATGGGACT ATATGCAGAC TGGTATCACT 60
AAACTGAAAC GGATTCTTGA GGGATTGCCT GAGCCGCAAT TCGACTCTGA GCAGTACATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016157--Cullin_CS
IPR016158--Cullin_homology
IPR001373--Cullin_N
IPR019559--Cullin_neddylation_domain
IPR016159--Cullin_repeat-like_dom
IPR011991--WHTH_DNA-bd_dom

PROSITE

PS01256--CULLIN_1
PS50069--CULLIN_2

Pfam

PF00888--Cullin
PF10557--Cullin_Nedd8

SMART

SM00182--CULLIN
SM00884--Cullin_Nedd8

Gene Ontology

GO:0031461--C:cullin-RING ubiquitin ligase complex
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000358	Aegilops tauschii	77.47	0.00e+00	1196.00
IUUC-Bdi-014240	Brachypodium distachyon	80.14	0.00e+00	1231.00
IUUC-Bol-016015	Brassica oleracea	99.32	0.00e+00	1488.00
IUUC-Cel-018294	Caenorhabditis elegans	28.80	1.00e-87	317.00
IUUC-Csv-026083	Ciona savignyi	30.78	7.00e-101	361.00
IUUC-Cne-026919	Cryptococcus neoformans	29.82	8.00e-94	337.00
IUUC-Cme-027277	Cyanidioschyzon merolae	25.94	1.00e-65	244.00
IUUC-Gma-043668	Glycine max	82.97	0.00e+00	1285.00
IUUC-Hvu-047383	Hordeum vulgare	80.27	0.00e+00	1237.00
IUUC-Lpe-051549	Leersia perrieri	78.78	0.00e+00	1208.00
IUUC-Mtr-058635	Medicago truncatula	81.62	0.00e+00	1260.00
IUUC-Mla-059021	Melampsora laricipopulina	30.73	6.00e-93	335.00
IUUC-Mac-065440	Musa acuminata	81.62	0.00e+00	1255.00
IUUC-Obr-076260	Oryza brachyantha	78.65	0.00e+00	1205.00
IUUC-Ogl-077579	Oryza glaberrima	78.65	0.00e+00	1207.00
IUUC-Oin-079171	Oryza indica	78.65	0.00e+00	1207.00
IUUC-Olu-087721	Ostreococcus lucimarinus	54.78	0.00e+00	808.00
IUUC-Ppa-095864	Physcomitrella patens	80.00	0.00e+00	1189.00
IUUC-Pop-100087	Populus trichocarpa	83.78	0.00e+00	1271.00
IUUC-Ppe-101349	Prunus persica	84.96	0.00e+00	1338.00
IUUC-Sce-106293	Saccharomyces cerevisiae	23.46	3.00e-56	213.00
IUUC-Smo-109541	Selaginella moellendorffii	79.01	0.00e+00	1156.00
IUUC-Sit-110264	Setaria italica	79.51	0.00e+00	1145.00
IUUC-Sly-111067	Solanum lycopersicum	83.65	0.00e+00	1285.00
IUUC-Stu-112374	Solanum tuberosum	81.90	0.00e+00	1214.00
IUUC-Sbi-114450	Sorghum bicolor	79.73	0.00e+00	1231.00
IUUC-Tca-121191	Theobroma cacao	87.67	0.00e+00	1340.00
IUUC-Tae-125618	Triticum aestivum	77.34	0.00e+00	1222.00
IUUC-Tur-126475	Triticum urartu	71.54	0.00e+00	1144.00
IUUC-Vvi-131423	Vitis vinifera	84.05	0.00e+00	1294.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence