• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Tag Content
iUUCD ID IUUC-Pop-099413
Ensembl Protein ID POPTR_0010s19500.1
UniProt Accession B9HSM7; B9HSM7_POPTR
Genbank Protein ID EEF01324.2
Protein Name Transducin family protein
Genbank Nucleotide ID CM000346
Gene Name POPTRDRAFT_593185; POPTR_0010s19500g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0010s19500 POPTR_0010s19500.1 POPTR_0010s19500.1
POPTR_0010s19500 POPTR_0010s19500.2 POPTR_0010s19500.2
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.80e-06 29.2 524 532
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 21   dDgtikvWD 29
            Dgt+k+WD
   Q: 524  QDGTVKIWD 532
           7******** PP
   
Organism Populus trichocarpa
Protein Sequence
(Fasta)
MFSKLFQRNT SQQPPPPPQQ QPPPQPQPQP QPQPQPPPTP PPAEVQDNVS KGVLTPKDIN 60
PRIALHYGIP STASILAFDH IQSLLAIGTL DGRIKVIGGN NIEGLLVSPK QSPFKYLEFL 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Pop-099413|E3,WD_repeat|Populus trichocarpa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGTTTTCCA AACTCTTTCA AAGAAACACC TCACAACAAC CACCACCTCC ACCTCAGCAA 60
CAACCACCAC CGCAACCGCA ACCACAACCA CAACCACAAC CACAACCACC ACCAACACCA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Pop-099413|E3,WD_repeat|Populus trichocarpa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR001388--Synaptobrevin
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS50892--V_SNARE
PS00678--WD_REPEATS_1
Pfam

PF00957--Synaptobrevin
SMART

SM00320--WD40
Gene Ontology

GO:0005737--C:cytoplasm
GO:0016021--C:integral component of membrane
GO:0005886--C:plasma membrane
GO:0005096--F:GTPase activator activity
GO:0017137--F:Rab GTPase binding
GO:0019905--F:syntaxin binding
GO:0017157--P:regulation of exocytosis
GO:0016192--P:vesicle-mediated transport
KEGG pop:POPTR_0010s19500g
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Atr-002583 Amborella trichopoda 46.54 0.00e+00 795.00
IUUC-Apl-003824 Anas platyrhynchos 21.05 1.00e-08 55.50
IUUC-Aly-005770 Arabidopsis lyrata 50.72 0.00e+00 994.00
IUUC-Ath-007643 Arabidopsis thaliana 51.33 0.00e+00 996.00
IUUC-Bta-013516 Bos taurus 20.59 7.00e-17 82.80
IUUC-Bci-013698 Botrytis cinerea 22.61 6.00e-15 75.90
IUUC-Bdi-015011 Brachypodium distachyon 43.76 0.00e+00 689.00
IUUC-Bol-015788 Brassica oleracea 51.05 0.00e+00 983.00
IUUC-Bra-017845 Brassica rapa 51.54 0.00e+00 1014.00
IUUC-Cel-018519 Caenorhabditis elegans 20.80 1.00e-11 65.50
IUUC-Cfa-020684 Canis familiaris 20.62 2.00e-17 85.10
IUUC-Csa-024071 Chlorocebus sabaeus 20.97 1.00e-17 85.50
IUUC-Dno-029242 Dasypus novemcinctus 20.42 4.00e-17 83.60
IUUC-Dse-031263 Dothistroma septosporum 22.77 2.00e-10 61.20
IUUC-Fca-036345 Felis catus 20.62 6.00e-17 82.40
IUUC-Fal-036915 Ficedula albicollis 21.85 2.00e-16 80.90
IUUC-Gma-043398 Glycine max 51.00 0.00e+00 938.00
IUUC-Ggo-044575 Gorilla gorilla 20.97 1.00e-17 85.50
IUUC-Hsa-045781 Homo sapiens 20.97 1.00e-17 85.50
IUUC-Hvu-047650 Hordeum vulgare 42.02 1.00e-171 596.00
IUUC-Itr-048031 Ictidomys tridecemlineatus 22.11 7.00e-06 46.20
IUUC-Lpe-051115 Leersia perrieri 42.96 0.00e+00 768.00
IUUC-Mcc-055188 Macaca mulatta 20.97 1.00e-17 85.50
IUUC-Meu-056246 Macropus eugenii 26.60 1.00e-12 68.60
IUUC-Mor-057129 Magnaporthe oryzae 21.61 2.00e-11 64.70
IUUC-Mtr-058362 Medicago truncatula 49.09 0.00e+00 936.00
IUUC-Mmr-061273 Microcebus murinus 21.32 4.00e-18 87.00
IUUC-Mmu-063800 Mus musculus 21.14 3.00e-17 84.00
IUUC-Mac-065436 Musa acuminata 40.08 0.00e+00 768.00
IUUC-Mlu-067278 Myotis lucifugus 20.45 8.00e-17 82.40
IUUC-Nle-069733 Nomascus leucogenys 20.97 1.00e-17 85.50
IUUC-Ont-072455 Oreochromis niloticus 20.36 5.00e-15 76.60
IUUC-Ocu-074214 Oryctolagus cuniculus 21.32 1.00e-17 85.50
IUUC-Oba-075180 Oryza barthii 42.24 0.00e+00 697.00
IUUC-Obr-076139 Oryza brachyantha 42.39 0.00e+00 779.00
IUUC-Ogl-077142 Oryza glaberrima 42.73 0.00e+00 704.00
IUUC-Ogu-079037 Oryza glumaepatula 42.35 0.00e+00 695.00
IUUC-Oin-079192 Oryza indica 43.06 0.00e+00 709.00
IUUC-Oni-082885 Oryza nivara 42.56 0.00e+00 703.00
IUUC-Oru-084893 Oryza rufipogon 43.99 9.00e-146 510.00
IUUC-Osa-085916 Oryza sativa 42.95 0.00e+00 705.00
IUUC-Ola-086914 Oryzias latipes 23.63 1.00e-08 55.50
IUUC-Oga-089148 Otolemur garnettii 20.80 2.00e-17 84.30
IUUC-Oar-090261 Ovis aries 20.42 9.00e-17 82.40
IUUC-Ptr-090697 Pan troglodytes 20.97 1.00e-17 85.50
IUUC-Pan-092899 Papio anubis 21.07 2.00e-17 85.10
IUUC-Psi-093249 Pelodiscus sinensis 20.85 1.00e-16 82.00
IUUC-Ppe-101236 Prunus persica 56.63 0.00e+00 1131.00
IUUC-Sit-110386 Setaria italica 43.09 0.00e+00 780.00
IUUC-Sly-111338 Solanum lycopersicum 54.63 1.00e-99 355.00
IUUC-Stu-112417 Solanum tuberosum 55.62 2.00e-102 365.00
IUUC-Sbi-114175 Sorghum bicolor 43.35 0.00e+00 776.00
IUUC-Sre-115050 Sporisorium reilianum 21.88 4.00e-04 40.40
IUUC-Tru-118038 Takifugu rubripes 21.55 3.00e-17 84.00
IUUC-Tca-121612 Theobroma cacao 58.43 0.00e+00 1221.00
IUUC-Tae-125452 Triticum aestivum 43.62 0.00e+00 786.00
IUUC-Tur-126560 Triticum urartu 42.41 0.00e+00 711.00
IUUC-Ttr-129239 Tursiops truncatus 20.24 9.00e-17 82.40
IUUC-Vvi-131567 Vitis vinifera 56.04 0.00e+00 1186.00
IUUC-Yli-134491 Yarrowia lipolytica 22.24 5.00e-18 86.70
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved