iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-105883

Ensembl Protein ID

ENSRNOP00000063887.1

UniProt Accession

F1M2S3; F1M2S3_RAT

Genbank Protein ID

ENSRNOP00000063887

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AC119015

Gene Name

RGD1561118

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000034060.3	ENSRNOT00000040561.3	ENSRNOP00000063887.1

Annotation

Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	3.80e-07	30.3	27	69

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 18   npsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyg 60
            +s+tV+eLK+ i++ l+ ppe+q L  ++++L++ ktL d+g
   Q: 27   QESSTVLELKRIIQGILKRPPEEQLLFKDDQLLDESKTLRDCG 69
           7899**************************************8 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

IKPEVATGME VFLMIRREKT TIFAEAQESS TVLELKRIIQ GILKRPPEEQ LLFKDDQLLD 60
ESKTLRDCGF TSRVAKPEDP ALVTLAFRED AFQLLHTHP 99

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCAAGCCAG AAGTAGCCAC AGGGATGGAA GTGTTTCTTA TGATCAGGCG TGAGAAGACC 60
ACCATCTTTG CTGAGGCCCA GGAGTCGAGC ACGGTCTTAG AGCTGAAGCG CATTATCCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

SMART

SM00213--UBQ

Gene Ontology

GO:0070449--C:elongin complex
GO:0030891--C:VCB complex

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000067	Aegilops tauschii	34.57	4.00e-07	50.10
IUUC-Cre-022721	Chlamydomonas reinhardtii	36.84	2.00e-07	47.40
IUUC-Hvu-047856	Hordeum vulgare	35.59	2.00e-07	46.60
IUUC-Sit-110780	Setaria italica	27.59	2.00e-05	40.00
IUUC-Sbi-114447	Sorghum bicolor	31.71	3.00e-07	45.80
IUUC-Tae-125514	Triticum aestivum	35.37	2.00e-09	53.50
IUUC-Tur-126569	Triticum urartu	33.33	2.00e-08	51.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence