iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-003133

Ensembl Protein ID

ERN17103

UniProt Accession

U5D9Q4; U5D9Q4_AMBTC

Genbank Protein ID

ERN17103.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

KI392384

Gene Name

AMTR_s00044p00102360

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00044p00102360	ERN17103	ERN17103

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.30e-23	81.6	775	846

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawceen 72
           +p++f+Cp++++l++dPv+l++G+t++rs+Ie+wl++g+k cP+t+q l+  ++   n +l+r+ +aw  e+
   Q: 775  TPKDFICPLTGQLFEDPVTLETGQTFERSAIEEWLRRGNKMCPTTKQALEYLTVpSTNFVLKRVLDAWKLEH 846
           79***********************************************999999*************9877 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MASLEQLLAE DGFLGRKSTE IASEKHMKCR SKVSSRSIEV SLPMYICNER NAPGSGQEGK 60
IRLGRTISDV SRHKGTKKSP NNEKIREIYR KGLRENERFR ERLSADFQEK SKFGKDYHRK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTCTC TAGAACAGCT TCTTGCTGAG GATGGGTTTC TAGGACGAAA ATCAACTGAG 60
ATAGCTTCAG AGAAACACAT GAAGTGTAGG TCTAAGGTTT CTTCTCGATC GATTGAGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

atr:18445436

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014999	Brachypodium distachyon	40.34	3.00e-44	172.00
IUUC-Gma-044073	Glycine max	39.13	3.00e-85	309.00
IUUC-Hvu-047722	Hordeum vulgare	36.83	2.00e-62	233.00
IUUC-Lpe-051567	Leersia perrieri	37.33	8.00e-63	234.00
IUUC-Mtr-058670	Medicago truncatula	37.68	2.00e-79	289.00
IUUC-Mac-065130	Musa acuminata	36.50	5.00e-135	474.00
IUUC-Oba-075449	Oryza barthii	35.64	2.00e-66	246.00
IUUC-Obr-076588	Oryza brachyantha	36.63	3.00e-65	242.00
IUUC-Ogu-078984	Oryza glumaepatula	35.43	1.00e-69	256.00
IUUC-Olo-080563	Oryza longistaminata	36.64	5.00e-43	167.00
IUUC-Ome-081747	Oryza meridionalis	32.99	9.00e-64	237.00
IUUC-Oni-082227	Oryza nivara	35.43	1.00e-64	240.00
IUUC-Opu-083803	Oryza punctata	38.16	4.00e-69	255.00
IUUC-Oru-084717	Oryza rufipogon	35.43	8.00e-67	247.00
IUUC-Osa-085390	Oryza sativa	37.97	3.00e-46	179.00
IUUC-Pop-099189	Populus trichocarpa	37.65	0.00e+00	690.00
IUUC-Ppe-101493	Prunus persica	45.13	3.00e-102	365.00
IUUC-Sit-110010	Setaria italica	38.63	3.00e-40	159.00
IUUC-Stu-112239	Solanum tuberosum	40.47	7.00e-91	326.00
IUUC-Sbi-113947	Sorghum bicolor	34.53	5.00e-71	261.00
IUUC-Tca-121435	Theobroma cacao	43.46	0.00e+00	692.00
IUUC-Tae-125606	Triticum aestivum	37.91	7.00e-70	257.00
IUUC-Tur-126526	Triticum urartu	37.28	6.00e-59	221.00
IUUC-Vvi-130964	Vitis vinifera	52.02	2.00e-123	436.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence