iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114303

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G386000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g040220	Sb02g040220.1	Sb02g040220.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.50e-08	35.8	94	133

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl+  +d  + +pCgH fh  Cl++w         + +CP+Cr
   Q: 94   CAICLDGVEDAGKEMPCGHRFHGGCLERW------LGVHGNCPVCR 133
           ********999999***************......9999******8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MASANDEDRA AAAGILRLLM GMAAAAPASA LPRGGGGAGG PGLVVVQHVF LDGDGDLFSG 60
GVGGGVPPAS KAAIAALKEV KAGEVEGGGE LGECAICLDG VEDAGKEMPC GHRFHGGCLE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTCGG CGAACGACGA AGATCGCGCG GCGGCGGCTG GCATCCTGCG GCTACTGATG 60
GGGATGGCGG CGGCGGCGCC CGCCTCGGCA TTGCCTCGGG GCGGCGGAGG TGCCGGGGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_02g040220

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000962	Aegilops tauschii	59.09	6.00e-11	60.10
IUUC-Bdi-014161	Brachypodium distachyon	51.49	8.00e-28	115.00
IUUC-Lpe-051413	Leersia perrieri	72.92	1.00e-26	111.00
IUUC-Oba-075941	Oryza barthii	61.03	1.00e-29	121.00
IUUC-Ogl-077929	Oryza glaberrima	61.03	1.00e-29	121.00
IUUC-Ogu-078544	Oryza glumaepatula	61.03	1.00e-29	121.00
IUUC-Oin-079202	Oryza indica	61.03	1.00e-29	121.00
IUUC-Ome-081593	Oryza meridionalis	54.05	2.00e-15	74.70
IUUC-Oni-082963	Oryza nivara	61.03	1.00e-29	121.00
IUUC-Opu-083292	Oryza punctata	52.66	6.00e-30	122.00
IUUC-Oru-085022	Oryza rufipogon	61.03	1.00e-29	121.00
IUUC-Osa-085676	Oryza sativa	61.03	1.00e-29	121.00
IUUC-Sit-109703	Setaria italica	79.75	2.00e-34	137.00
IUUC-Tae-125110	Triticum aestivum	56.44	1.00e-33	134.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence