iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112347

Ensembl Protein ID

PGSC0003DMT400038606

UniProt Accession

M1B761; M1B761_SOLTU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400014914	PGSC0003DMT400038606	PGSC0003DMT400038606

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.70e-26	93.3	281	352

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +pee++CpIsl+lM +Pv+++sG++y++ +Iekw+++g++tcP+t+q+l +  l+Pn+ ++ l+ +wce+ +
   Q: 281  PPEELRCPISLQLMYNPVIIASGQSYEKICIEKWFSDGHNTCPKTQQELPHLGLTPNYCVKGLVASWCEQYG 352
           69*******************************************************************976 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MENTEVEENL LSIGEPKLHG GMCKSLSAVY AKVLGIFPEL EAARPRSTSG IQALCALHIA 60
LEKTKNVLQH CSECSKLYLA ITGDSIVLKF ERARCALEDS LKRVEDIVPQ SIGCQISDVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAAAAAA AACATAAGTT TTTGGATCTG CAACAATAAA GCCTTGTTGA TTTGATGATT 60
AACAAAGTTA TCAAATGTAT TGTTAGGATT AATTTCAGCA GTTTTTCATG AAGCCTCCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000843	Aegilops tauschii	52.23	0.00e+00	773.00
IUUC-Atr-002816	Amborella trichopoda	53.70	0.00e+00	766.00
IUUC-Aly-005662	Arabidopsis lyrata	63.88	0.00e+00	936.00
IUUC-Ath-006967	Arabidopsis thaliana	63.50	0.00e+00	930.00
IUUC-Bdi-014509	Brachypodium distachyon	54.42	0.00e+00	762.00
IUUC-Bol-015179	Brassica oleracea	62.56	0.00e+00	954.00
IUUC-Bra-017668	Brassica rapa	63.30	0.00e+00	944.00
IUUC-Gma-043476	Glycine max	67.01	0.00e+00	1017.00
IUUC-Hvu-047761	Hordeum vulgare	52.78	0.00e+00	759.00
IUUC-Lpe-051154	Leersia perrieri	54.34	0.00e+00	781.00
IUUC-Mtr-058026	Medicago truncatula	65.41	0.00e+00	941.00
IUUC-Mac-064644	Musa acuminata	50.19	0.00e+00	675.00
IUUC-Oba-075037	Oryza barthii	54.03	0.00e+00	809.00
IUUC-Obr-076068	Oryza brachyantha	52.83	0.00e+00	776.00
IUUC-Ogl-077029	Oryza glaberrima	54.03	0.00e+00	809.00
IUUC-Ogu-078230	Oryza glumaepatula	53.79	0.00e+00	803.00
IUUC-Oin-079566	Oryza indica	53.96	0.00e+00	808.00
IUUC-Olo-080879	Oryza longistaminata	54.86	0.00e+00	769.00
IUUC-Ome-081577	Oryza meridionalis	53.84	0.00e+00	806.00
IUUC-Oni-082610	Oryza nivara	53.71	0.00e+00	801.00
IUUC-Opu-083186	Oryza punctata	53.72	0.00e+00	807.00
IUUC-Oru-084375	Oryza rufipogon	53.41	0.00e+00	796.00
IUUC-Osa-085376	Oryza sativa	53.84	0.00e+00	799.00
IUUC-Ppa-095879	Physcomitrella patens	36.65	9.00e-125	440.00
IUUC-Pop-100088	Populus trichocarpa	69.58	0.00e+00	1096.00
IUUC-Ppe-101913	Prunus persica	69.62	0.00e+00	1077.00
IUUC-Sit-109865	Setaria italica	52.72	0.00e+00	790.00
IUUC-Sly-110840	Solanum lycopersicum	97.27	0.00e+00	1438.00
IUUC-Sbi-114310	Sorghum bicolor	52.64	0.00e+00	783.00
IUUC-Tca-121734	Theobroma cacao	71.52	0.00e+00	1092.00
IUUC-Tae-123152	Triticum aestivum	53.09	0.00e+00	771.00
IUUC-Tur-126692	Triticum urartu	49.73	0.00e+00	662.00
IUUC-Vvi-131273	Vitis vinifera	71.46	0.00e+00	1144.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence