iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112356

Ensembl Protein ID

PGSC0003DMT400076326

UniProt Accession

M1CWJ3; M1CWJ3_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400029675	PGSC0003DMT400076326	PGSC0003DMT400076326
PGSC0003DMG400029675	PGSC0003DMT400076327	PGSC0003DMT400076327

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/APC_C/CDC20	9.40e-141	469.7	183	481
E3 adaptor/Cullin RING/DCX/DWD	1.10e-24	86.7	317	351

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 1    pekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladleekdlvtsvswieegtllavGtkkgeveiyDveekkkv 89
           p+kvldap+l+ddfylnL+dWss+nvlav+Lg++vylw a+++ v+kl+dl ++d+v+sv+w++eg+++++Gt+ g+v+++D +++kkv
   Q: 183  PHKVLDAPSLQDDFYLNLVDWSSQNVLAVGLGTCVYLWTASNSRVTKLCDLGPTDSVCSVQWTREGSYISIGTSLGQVQVWDGTQCKKV 271
           689************************************************************************************** PP
   S: 90   rtltghsarvgaLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdasssePlkkfkeh 178
           rt+ gh++r g L+W + +lssGsrd++il++dvrv+   +s++ +h++evCGlkw++d+++LasGGnDn++ vw+++s++P+ k +eh
   Q: 272  RTFGGHQTRTGVLAWSSRILSSGSRDRNILQHDVRVPSDFVSKFIGHKSEVCGLKWSHDDRELASGGNDNQLLVWNQRSQQPVLKLTEH 360
           ***************************************************************************************** PP
   S: 179  kaavkaiawsPwqkslLasGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkghe 267
           +aavkai+wsP+q +lLasGGGtaDrci+fwnt++g++l++idtgsqvc+l+ws++ +e+vsthG+++n+i++wkyps+skva+l+gh+
   Q: 361  TAAVKAITWSPHQCGLLASGGGTADRCIRFWNTTNGNQLNHIDTGSQVCNLAWSRNVNEIVSTHGYSQNQIMVWKYPSMSKVATLTGHS 449
           ***************************************************************************************** PP
   S: 268  aRvlslalspdgeaivtaagDetlrfwklfdk 299
           +Rvl+la+spdg++ivt+agDetlrfw++f +
   Q: 450  LRVLYLAMSPDGQTIVTGAGDETLRFWNVFPS 481
           *****************************976 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           gH+++v++l++ +d + l+sG++D+++ vW+ r++
   Q: 317  GHKSEVCGLKWsHDdRELASGGNDNQLLVWNQRSQ 351
           8***********55599**************8776 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MESITQRRKS GINLPSTMSE TSLRLDAFSS PPRSKRTTNL ASSPMSNRSP RTISNLSSSP 60
SSKSASCSDR FIPCRSSSRL HTFGLVEKAS PVKEGGGNND AYSRLLKSEL FGADFGCFSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTCATAATA TTTCATCAAA TCCTCCTTCC TTTCTCACTA AATAAACTAT CCGTTACCTT 60
CCTTCCTTCT TTCCATCAAC AACATAGAGG TTTTTTCTAT ACAGAATTTG AGCTTCCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG

sot:102600890

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003035	Amborella trichopoda	68.04	0.00e+00	640.00
IUUC-Aly-006009	Arabidopsis lyrata	75.75	0.00e+00	696.00
IUUC-Ath-007167	Arabidopsis thaliana	74.85	0.00e+00	679.00
IUUC-Bdi-015033	Brachypodium distachyon	68.86	9.00e-177	611.00
IUUC-Bol-016159	Brassica oleracea	73.73	0.00e+00	675.00
IUUC-Bra-017745	Brassica rapa	73.58	0.00e+00	673.00
IUUC-Cre-022944	Chlamydomonas reinhardtii	46.70	2.00e-102	365.00
IUUC-Ete-032562	Echinops telfairi	71.43	4.00e-84	304.00
IUUC-Gma-043563	Glycine max	75.15	0.00e+00	709.00
IUUC-Hvu-047486	Hordeum vulgare	80.68	4.00e-150	522.00
IUUC-Lpe-051568	Leersia perrieri	66.81	6.00e-168	582.00
IUUC-Mtr-057760	Medicago truncatula	75.64	0.00e+00	711.00
IUUC-Mac-064942	Musa acuminata	78.57	0.00e+00	680.00
IUUC-Oba-075417	Oryza barthii	78.32	2.00e-160	557.00
IUUC-Obr-076033	Oryza brachyantha	75.74	0.00e+00	643.00
IUUC-Ogl-077441	Oryza glaberrima	74.66	0.00e+00	625.00
IUUC-Ogu-078877	Oryza glumaepatula	72.95	1.00e-175	607.00
IUUC-Oin-079461	Oryza indica	72.37	6.00e-172	595.00
IUUC-Olo-080716	Oryza longistaminata	73.10	3.00e-166	577.00
IUUC-Ome-081663	Oryza meridionalis	74.24	1.00e-173	602.00
IUUC-Oni-083097	Oryza nivara	72.37	1.00e-171	595.00
IUUC-Opu-083464	Oryza punctata	72.95	2.00e-171	593.00
IUUC-Oru-084848	Oryza rufipogon	72.37	1.00e-171	595.00
IUUC-Osa-085451	Oryza sativa	74.66	0.00e+00	625.00
IUUC-Pno-095139	Phaeosphaeria nodorum	57.82	8.00e-117	412.00
IUUC-Ppa-095366	Physcomitrella patens	63.16	1.00e-177	614.00
IUUC-Pop-099269	Populus trichocarpa	80.52	0.00e+00	742.00
IUUC-Ppe-101285	Prunus persica	78.27	0.00e+00	709.00
IUUC-Sit-110550	Setaria italica	68.01	0.00e+00	630.00
IUUC-Sly-111395	Solanum lycopersicum	97.42	0.00e+00	910.00
IUUC-Sbi-114386	Sorghum bicolor	68.55	7.00e-180	622.00
IUUC-Sre-115222	Sporisorium reilianum	61.79	1.00e-112	399.00
IUUC-Tsy-118931	Tarsius syrichta	40.27	9.00e-58	216.00
IUUC-Tca-121682	Theobroma cacao	81.89	0.00e+00	743.00
IUUC-Tae-123028	Triticum aestivum	73.10	0.00e+00	629.00
IUUC-Tur-126545	Triticum urartu	75.32	3.00e-138	483.00
IUUC-Uma-129555	Ustilago maydis	61.79	1.00e-112	399.00
IUUC-Vvi-131748	Vitis vinifera	82.13	0.00e+00	773.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence