iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113845

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G020300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g001885	Sb02g001885.1	Sb02g001885.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.20e-07	30.9	20	61

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlC 45
           Ca+Cl+  +dg  ++ l+C H+fh+ C+ +w     + +++++CPlC
   Q: 20   CAFCLSAVRDGeeVRELRCHHFFHHACIDAW-----LVRPRATCPLC 61
           ******8844444******************.....89********* PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

YRRRQGQGQE EKAAETDSDC AFCLSAVRDG EEVRELRCHH FFHHACIDAW LVRPRATCPL 60
CCDRLLPADV PLTSESGYNR LSSSASAYTH GGAIWWHMT 99

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Nucleotide Sequence
(Fasta)

TACCGCCGCA GGCAAGGGCA GGGCCAGGAG GAGAAGGCGG CAGAGACGGA CTCAGATTGT 60
GCCTTCTGCC TTTCCGCGGT CCGCGACGGC GAGGAGGTGC GCGAGCTGCG GTGCCACCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_02g001885

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014127	Brachypodium distachyon	71.43	7.00e-19	86.30
IUUC-Hvu-047125	Hordeum vulgare	71.70	8.00e-19	85.90
IUUC-Lpe-051178	Leersia perrieri	75.00	4.00e-16	76.60
IUUC-Ogl-077400	Oryza glaberrima	79.49	3.00e-13	67.80
IUUC-Ogu-078439	Oryza glumaepatula	79.49	2.00e-13	67.80
IUUC-Oin-079304	Oryza indica	79.49	2.00e-13	67.80
IUUC-Ome-081389	Oryza meridionalis	79.49	2.00e-13	68.20
IUUC-Oni-082289	Oryza nivara	79.49	2.00e-13	67.80
IUUC-Opu-083744	Oryza punctata	46.88	2.00e-13	68.20
IUUC-Oru-084582	Oryza rufipogon	79.49	2.00e-13	67.80
IUUC-Osa-086086	Oryza sativa	79.49	2.00e-13	67.80
IUUC-Ppe-101263	Prunus persica	42.03	3.00e-12	63.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence