iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114514

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G367000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g040850	Sb03g040850.1	Sb03g040850.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.60e-29	100.4	8	83

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwl....asggktcPvtrqpl.teedlvPnltlrrliqawcee 71
           evp++flCpIsl+lMr+Pv+lp+Gi+ydr++I +wl      gg+tcPvtr pl  + +l+Pn+tlrrli+aw+++
   Q: 8    EVPSHFLCPISLQLMREPVTLPTGISYDRAAISRWLaapaPAGGRTCPVTRVPLpPQPQLTPNHTLRRLIHAWLAS 83
           69**********************************7666567779********666678*************986 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MASAPAGEVP SHFLCPISLQ LMREPVTLPT GISYDRAAIS RWLAAPAPAG GRTCPVTRVP 60
LPPQPQLTPN HTLRRLIHAW LASLSPEAEV DEDVAALRRP VPGAEVAALL SHAAAAQVEA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGAGCG CGCCTGCTGG CGAGGTGCCG TCCCACTTCC TCTGCCCCAT CTCGCTGCAG 60
CTCATGCGGG AACCCGTCAC GCTGCCCACC GGCATCTCCT ACGACCGCGC CGCTATCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sbi:SORBI_03g040850

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014995	Brachypodium distachyon	76.03	6.00e-135	473.00
IUUC-Lpe-051637	Leersia perrieri	75.74	2.00e-131	461.00
IUUC-Oba-075228	Oryza barthii	75.98	2.00e-127	447.00
IUUC-Ogl-077014	Oryza glaberrima	79.17	5.00e-137	479.00
IUUC-Ogu-078714	Oryza glumaepatula	78.68	4.00e-141	493.00
IUUC-Oin-079548	Oryza indica	78.92	1.00e-136	478.00
IUUC-Ome-081970	Oryza meridionalis	78.68	5.00e-136	476.00
IUUC-Oni-082125	Oryza nivara	78.92	1.00e-136	478.00
IUUC-Opu-083723	Oryza punctata	77.45	3.00e-129	454.00
IUUC-Oru-084245	Oryza rufipogon	78.92	3.00e-144	503.00
IUUC-Osa-086092	Oryza sativa	79.30	4.00e-136	476.00
IUUC-Sit-110520	Setaria italica	92.67	1.00e-161	561.00
IUUC-Tae-124162	Triticum aestivum	79.56	5.00e-138	483.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence