iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015912

Ensembl Protein ID

Bo5g034640.1

UniProt Accession

A0A0D3CC58; A0A0D3CC58_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo5g034640	Bo5g034640.1	Bo5g034640.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-17	63.4	519	555

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsdtllvsGsdDgtikvWDlrtgvllk 37
           gH+ds+t+la  d++l s+s D++i++W+l+++  ++
   Q: 519  GHQDSITGLAVGDGFLFSSSLDKNIHIWSLKDFSHVH 555
           8*********956*****************9987665 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MEEQPECPVC LQSYDGESTL PRVLSCGHTA CEECLTNIPK KFPDTIRCPA CTVLVKFPPQ 60
GPSALPKNID LLRLFPSISN LTPDSTRNSK KSSFEFVARS WPDEFHAAWK DRVLLLDAVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGAGC AACCGGAGTG TCCGGTCTGT CTACAATCAT ACGACGGCGA ATCCACACTT 60
CCACGCGTGC TCTCCTGCGG CCACACGGCG TGCGAAGAAT GTCTAACGAA CATCCCCAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50089--ZF_RING_2

Pfam

PF00400--WD40
PF13445--zf-RING_UBOX

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00184--RING
SM00320--WD40

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000569	Aegilops tauschii	30.72	2.00e-71	263.00
IUUC-Atr-003105	Amborella trichopoda	36.73	2.00e-127	450.00
IUUC-Aly-006480	Arabidopsis lyrata	67.66	0.00e+00	961.00
IUUC-Ath-007304	Arabidopsis thaliana	73.41	0.00e+00	1146.00
IUUC-Bdi-015002	Brachypodium distachyon	37.48	2.00e-102	366.00
IUUC-Bra-017564	Brassica rapa	90.74	0.00e+00	1415.00
IUUC-Gma-043879	Glycine max	43.33	7.00e-176	610.00
IUUC-Hvu-047671	Hordeum vulgare	36.73	3.00e-108	385.00
IUUC-Lpe-051223	Leersia perrieri	35.80	6.00e-94	338.00
IUUC-Mtr-058342	Medicago truncatula	61.54	3.00e-99	355.00
IUUC-Mac-065113	Musa acuminata	37.43	7.00e-135	474.00
IUUC-Oba-075807	Oryza barthii	36.26	9.00e-105	374.00
IUUC-Obr-076101	Oryza brachyantha	37.36	5.00e-104	372.00
IUUC-Ogl-077321	Oryza glaberrima	35.42	2.00e-102	367.00
IUUC-Ogu-078456	Oryza glumaepatula	36.54	2.00e-102	367.00
IUUC-Oin-079822	Oryza indica	36.44	9.00e-105	374.00
IUUC-Olo-080336	Oryza longistaminata	37.63	5.00e-99	354.00
IUUC-Ome-081976	Oryza meridionalis	36.75	2.00e-104	373.00
IUUC-Oni-082359	Oryza nivara	36.23	3.00e-104	372.00
IUUC-Opu-083757	Oryza punctata	36.21	1.00e-101	364.00
IUUC-Oru-085207	Oryza rufipogon	36.33	2.00e-104	373.00
IUUC-Osa-085546	Oryza sativa	31.70	4.00e-55	209.00
IUUC-Ppa-095665	Physcomitrella patens	36.34	2.00e-53	203.00
IUUC-Pop-098862	Populus trichocarpa	47.69	0.00e+00	711.00
IUUC-Ppe-101295	Prunus persica	44.98	0.00e+00	652.00
IUUC-Smo-109481	Selaginella moellendorffii	27.69	3.00e-46	180.00
IUUC-Sit-110599	Setaria italica	36.64	9.00e-101	361.00
IUUC-Sly-111867	Solanum lycopersicum	54.00	7.00e-104	370.00
IUUC-Stu-112296	Solanum tuberosum	41.00	1.00e-171	596.00
IUUC-Sbi-114828	Sorghum bicolor	38.27	4.00e-106	379.00
IUUC-Tca-121601	Theobroma cacao	46.96	0.00e+00	709.00
IUUC-Tae-125330	Triticum aestivum	37.42	1.00e-108	387.00
IUUC-Tur-126303	Triticum urartu	38.54	2.00e-105	375.00
IUUC-Vvi-130947	Vitis vinifera	47.39	0.00e+00	720.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence